HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN18029_c0_g1_i3
Heat Stress Genes A6B
Ensembl Plants
New Transcript Id TraesCS6D02G083800.1
Functional Annotation
Gene ontology AHZ44766.1
Protein family Detail
Type -
Transcripts Per Million
TPM 2.69
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 1.86
Sequence AGTTTGCCAATGAGGGTTTCCTACGGGGACAGAGGCACCTGCTGAAGAACATCAGGCGTCGAAAAC
CTCCCGCTCATACTGCTTCAAATCAGCAGTCCCTTGGATCTTACCTTGAAGTGGGGCACTTCGGAT
ATGATGCAGAGATCGACCGGCTGAAAAGGGACAAACAGCTATTGATGGCAGAAGTGGTGAAGCTAA
GGCAGGAACAGCAGAACATGAAGGTAAATCTGAAAGCCATGGAGGATAGGCTACGTGGAACCGAGC
AGAAGCAGCAGCAGATGACTTCATTCATGGCACGTATCTTGCGGAACCCTGAATTCTTGAAGCAAC
TGATTGCCAAGAATGGGATGAGGAAGGAGCTCCAAGACGCTATCTCGAAGAAAAGGAGGCGCCGCA
TCGACGGTGGACCTGAAGCTTATGCCGTGGGTGCTAGTAGCAGCAACCTGGAGCAAGAGTCGCCTG
TTGTGTTTGATTCTCATGGGTCAGTGGAACTTCTTGCCGAGGGGGCAGTGCCGGTGCCGGTGGAAC
TCCTTGCTGATGGGATCCCACCAGATCTGGAAGGTTCAGTGGCACTCCTTGATGACGGGATTCCAC
CTGACCTGGAATGTTCAGTGGAACTCCTTGTTGATGGGATTCCAGCTGATCTCAACGGCTCAGGCA
TCGACGCTAACGGCGTAACAGAGCCACAGGATTTTGGTCTCGGTACATGTGAAGCGCAGCAGAACA
GAGTCCCGGGGTTGTTCCATGATAATTTCTGGGAGGAGCTGCTGAACAAAGGGCTCAGCGGTGAGA
ACGACGAGCCGGTTAACGCCGACGGCATGGATGTGCTGTCTGAGAAGATGGGTTATTTCATCCCAA
ATAGTCCAACCCTCTCAACCTAGTTCCATTCCATTCTATCAAATTGCCGCGACTTTCTTCATGTTT
CACCTATCCACCCTGTGGTGCCTATGCAAGTGTCGGCAGTGATTCCCCACCGTGTCCTGGTCTTCG
AGTCGTCTAAACCCTAGACTTCCCTGGGATTATG TGATTTATGAGTGTTTCCTTCGATTGACCT
TAGAGATCTGTTTGTTGTTTCAGGCAATATAGCCTCGTCAGTCTGTAAAGCGGGCGCTGCTAGGTG
TTCAATGCACATGTTCTGGTCTATACCGTGTAAGGCAGTCTTTTGTGGACTAAAGTTGTACTCCTG
TCTGGATTTATAGGCCATCTTGTGGTTAGGTCGTCAATTTGACT
Metabolic Pathways
Description loc_os07g08140.1:337.0)no description available & (at3g22830:157.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In regulation of transcription, DNA-dependent
Located In nucleus
Expressed In root
Expressed_During -
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 314.0) & (original description: len=1230 path=[0:0-212 2:213-1229])

Ensembl Plants
Sequence Id	TRINITY_DN18029_c0_g1_i3
Heat Stress Genes	A6B
New Transcript Id	TraesCS6D02G083800.1
Functional Annotation
Gene ontology	AHZ44766.1
Protein family Detail
Type	-
Transcripts Per Million
TPM	2.69
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	1.86
Sequence	AGTTTGCCAATGAGGGTTTCCTACGGGGACAGAGGCACCTGCTGAAGAACATCAGGCGTCGAAAAC CTCCCGCTCATACTGCTTCAAATCAGCAGTCCCTTGGATCTTACCTTGAAGTGGGGCACTTCGGAT ATGATGCAGAGATCGACCGGCTGAAAAGGGACAAACAGCTATTGATGGCAGAAGTGGTGAAGCTAA GGCAGGAACAGCAGAACATGAAGGTAAATCTGAAAGCCATGGAGGATAGGCTACGTGGAACCGAGC AGAAGCAGCAGCAGATGACTTCATTCATGGCACGTATCTTGCGGAACCCTGAATTCTTGAAGCAAC TGATTGCCAAGAATGGGATGAGGAAGGAGCTCCAAGACGCTATCTCGAAGAAAAGGAGGCGCCGCA TCGACGGTGGACCTGAAGCTTATGCCGTGGGTGCTAGTAGCAGCAACCTGGAGCAAGAGTCGCCTG TTGTGTTTGATTCTCATGGGTCAGTGGAACTTCTTGCCGAGGGGGCAGTGCCGGTGCCGGTGGAAC TCCTTGCTGATGGGATCCCACCAGATCTGGAAGGTTCAGTGGCACTCCTTGATGACGGGATTCCAC CTGACCTGGAATGTTCAGTGGAACTCCTTGTTGATGGGATTCCAGCTGATCTCAACGGCTCAGGCA TCGACGCTAACGGCGTAACAGAGCCACAGGATTTTGGTCTCGGTACATGTGAAGCGCAGCAGAACA GAGTCCCGGGGTTGTTCCATGATAATTTCTGGGAGGAGCTGCTGAACAAAGGGCTCAGCGGTGAGA ACGACGAGCCGGTTAACGCCGACGGCATGGATGTGCTGTCTGAGAAGATGGGTTATTTCATCCCAA ATAGTCCAACCCTCTCAACCTAGTTCCATTCCATTCTATCAAATTGCCGCGACTTTCTTCATGTTT CACCTATCCACCCTGTGGTGCCTATGCAAGTGTCGGCAGTGATTCCCCACCGTGTCCTGGTCTTCG AGTCGTCTAAACCCTAGACTTCCCTGGGATTATG TGATTTATGAGTGTTTCCTTCGATTGACCT TAGAGATCTGTTTGTTGTTTCAGGCAATATAGCCTCGTCAGTCTGTAAAGCGGGCGCTGCTAGGTG TTCAATGCACATGTTCTGGTCTATACCGTGTAAGGCAGTCTTTTGTGGACTAAAGTTGTACTCCTG TCTGGATTTATAGGCCATCTTGTGGTTAGGTCGTCAATTTGACT
Metabolic Pathways
Description	loc_os07g08140.1:337.0)no description available & (at3g22830:157.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function	DNA binding, sequence-specific DNA binding transcription factor activity
Involve In	regulation of transcription, DNA-dependent
Located In	nucleus
Expressed In	root
Expressed_During	-
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 314.0) & (original description: len=1230 path=[0:0-212 2:213-1229])