HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN24657_c0_g1_i5
Heat Stress Genes B3
Ensembl Plants
New Transcript Id TraesCSU02G105800.2
Functional Annotation
Gene ontology BAJ96942.1
Protein family Detail
Type Domain
Transcripts Per Million
TPM 1.09
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 0.76
Sequence CCCGGACCGAAAGCAACCGCCGCTAGCGCTCGCGACGGCGTGACGACCCACCTCTGTCTCTCGCTC
CGTCCTCCTTTATATCCCCCGCGGCTGCAGGGGAAGGCGAGGCTAGCGGAGGTAGGAGAAGAGAGG
AGGGCCGTCGCGGCAACCACAGACAAACCCAGCCGAAAGGCGCACGCACCACCGTGCCGGTTACAT
GGGAGGAGGCCGCGGTCTGGTCACCGGGTTCTACGTCTGGGGCTGGGAGTTCCTCACCGCGCTGCT
CCTCTTCTCCGCCGCCGTCTCCTGCTAGCCACCTCTCCTTCTCGATCGATCCTTGACTGATTATAC
TCCAATCATATATACATAGATACATACACCAGCTTATTATTAGGTAGAGAGACATCTGTTAGGTGA
TTAAGCCGGCGAGGATGGCCGGGGCGGCGGCGCAGCAGCAGCAGAAGGGTGGTGGTGGTGGTGTGG
CGAGGGCCGGCGGCGGAGGGCCGGCGCCGTTCCTGACGAAGACGCACCAGATGGTGGAGGAGCGCG
GGACGGACGAGGTGATCTCGTGGAGCGAGCACGGGCGGTCGTTCGTGGTGTGGAAGCCCGTGGAGC
TGGCCCGCGACCTCCTCCCGCTCCACTTCAAGCACTGCAACTTCTCCTCCTTCGTCCGCCAGCTCA
ACACCTACGTACGTACCACCACTCTCCTCCAATCCAAGCACACGCTCTCTCTGCAATACTCTTACC
TCTGCCTTCACTAAATTATTAATCACTCCCGTCCGCACTGATCAACGACTTACGACTTGAGTAGAG
TATATGCGTTCTTGTTTGATTTTTATTATTATTTGGAGGAAAAAAGAAGCATCCCGTTCGTCCTCT
TAGAGTGATTAGAGATTAGAGATGCAAGTGATGGATCCATATCCTAGTAGCTTGTGCTAGAAGAGA
TTGTTGTGATCAGATACGGTCGGCAGCTTCCAGAGGAGACACGCCCCTGACGTGTCCACGGGAAGC
TCTCGGCCCTTCTAGCTTTTGTTCTCCACACCAC ATATTAGTGCGTGCTCACGCTACGTAGCAT
ACTACTAGTACTACAGTGGTACAGATTGAGCACAGCCGGCCGGTGGATTCTTTTCCGGCGAGGAAT
TAAGCGTGGTCGCTACTAGTGGTACTAGTAAGAACAATTGTCACGAGACCGAGGTAAGGCACGTGG
CATGCACGTAAGGATGTTTCTGGTTGGGACTTCATTTTGCTGTCTCGGCCGTACACGTCCTAGAAT
GGATCCACTACTACACATACGGCTAGCCAGCGCGCATGTTCCACTGTTCGCGGTGGGGTCTCCATT
CAAAAGCGCGTGTGGACTTTGGGCAAAGCGAACGGGTGAAACATCTCGAGCTAGCTAATTACATAC
TCATGTTTGTTGGACGGACAAATCTGGATTTACCGGCTAGTAGTGCAGAAGAAGTACATGGAAGAA
AGTGACACATAAAAAAAGGCTACTAGTACCTTATTTTTCCTAGTAGGCTGTTGGTTGGAACAATAT
GGAAGAAAGATGACGCCCAAAGAGCCTTTCTGGTCGACCTAAAACGTAGAAAACGAGCAACGCGTT
TCACTTGTCGTGTCATGCAACGATATGTATATAAAAAGAGCCCCTTTGTGCTGACCATTGACAGGG
TAGGTGACAACAAAACTAGCTACGTGCGCGCGTGCCGTCTGCGAGTCAATAAACCATTTCAGTTTC
CCACGCTTGAGCGTACACGCTTGGACATTAACGCAAAAAGAAAAAGGATAGTAGCTGCTTGGAAAA
TAGCGAGAAAAGACAGTGCAACTTAGAGGGGCGGTGAAAAAACGTGACTAGTGCTGAGTGGTGATG
TCGCCTTCGCCTTTTCCTTTTGACAAAATGTGGCCGGTTATCTGGACGTGACGGTCACCGATACCA
TATAAGTGTGCAAATAATCGACAGGACGGGTGGACGGACGCGGCACCACGTTAGAGATGGATGCCA
ACGGGTTCCATGAAAGCAAATTTAGTGCTTGCCCATCACTGTTTAACACCCCACGAGGTTGAGGTT
TTAA TTTAGTGCGTCCACATTTGTGATTACGCGGGGACTGGAAGCTTGGTGGAACTTTCGACCG
GATATCTTTGTGTCCTCTTCTGGAAACCACTCTAGGAAATAGAGCTTCTTTTATTTATTTTTACGA
AAAGGGCTCAGATCTATTATAGATGTTTTAAAAAATATAGGTTCTTAAAATTCATGACATGCACCT
ATACAATGCACATTCATTCATCATAGTGAAAACCAATCTTCAATGAAAAGTGTCTACTAGAAAGTC
CACTAAAGAATGAATTCTTGCAAAAAAAAAATCAAACAAAAGAGGTCATTTAACTTTTCATAATTA
TCATTTTAATGTGCACATCGAATTGGAAATCCTATAGAAAACAAAGTCGCTAGCAACCGGTTTTTG
TGCGAAGCTACCTTATTTGAAAAGTGGACGATGCTTCAGAAAGCATGGTCATTTTTTTTATCATCT
ACTCCCTCCGTCCCATAATGTAAGATGTTACACTGTG
Metabolic Pathways
Description loc_os09g28354.1:115.0)no description available & (at2g41690:95.9) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor B3 (HSFB3)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In response to cadmium ion
Located In nucleus
Expressed In inflorescence meristem, leaf whorl, flower, cultured cell
Expressed_During 4 anthesis, petal differentiation and expansion stage
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor B2A (TAIR:AT5G62020.1) Has 2046 Blast hits to 2034 proteins in 225 species: Archae - 0 Bacteria - 0 Metazoa - 329 Fungi - 465 Plants - 775 Viruses - 0 Other Eukaryotes - 477 (source: NCBI BLink). & (reliability: 188.8) & (original description: len=2541 path=[0:0-668 2:669-2058 5:2059-2115 7:2116-2177 9:2178-2273 10:2274-2305 11:2306-2540])

Ensembl Plants
Sequence Id	TRINITY_DN24657_c0_g1_i5
Heat Stress Genes	B3
New Transcript Id	TraesCSU02G105800.2
Functional Annotation
Gene ontology	BAJ96942.1
Protein family Detail
Type	Domain
Transcripts Per Million
TPM	1.09
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	0.76
Sequence	CCCGGACCGAAAGCAACCGCCGCTAGCGCTCGCGACGGCGTGACGACCCACCTCTGTCTCTCGCTC CGTCCTCCTTTATATCCCCCGCGGCTGCAGGGGAAGGCGAGGCTAGCGGAGGTAGGAGAAGAGAGG AGGGCCGTCGCGGCAACCACAGACAAACCCAGCCGAAAGGCGCACGCACCACCGTGCCGGTTACAT GGGAGGAGGCCGCGGTCTGGTCACCGGGTTCTACGTCTGGGGCTGGGAGTTCCTCACCGCGCTGCT CCTCTTCTCCGCCGCCGTCTCCTGCTAGCCACCTCTCCTTCTCGATCGATCCTTGACTGATTATAC TCCAATCATATATACATAGATACATACACCAGCTTATTATTAGGTAGAGAGACATCTGTTAGGTGA TTAAGCCGGCGAGGATGGCCGGGGCGGCGGCGCAGCAGCAGCAGAAGGGTGGTGGTGGTGGTGTGG CGAGGGCCGGCGGCGGAGGGCCGGCGCCGTTCCTGACGAAGACGCACCAGATGGTGGAGGAGCGCG GGACGGACGAGGTGATCTCGTGGAGCGAGCACGGGCGGTCGTTCGTGGTGTGGAAGCCCGTGGAGC TGGCCCGCGACCTCCTCCCGCTCCACTTCAAGCACTGCAACTTCTCCTCCTTCGTCCGCCAGCTCA ACACCTACGTACGTACCACCACTCTCCTCCAATCCAAGCACACGCTCTCTCTGCAATACTCTTACC TCTGCCTTCACTAAATTATTAATCACTCCCGTCCGCACTGATCAACGACTTACGACTTGAGTAGAG TATATGCGTTCTTGTTTGATTTTTATTATTATTTGGAGGAAAAAAGAAGCATCCCGTTCGTCCTCT TAGAGTGATTAGAGATTAGAGATGCAAGTGATGGATCCATATCCTAGTAGCTTGTGCTAGAAGAGA TTGTTGTGATCAGATACGGTCGGCAGCTTCCAGAGGAGACACGCCCCTGACGTGTCCACGGGAAGC TCTCGGCCCTTCTAGCTTTTGTTCTCCACACCAC ATATTAGTGCGTGCTCACGCTACGTAGCAT ACTACTAGTACTACAGTGGTACAGATTGAGCACAGCCGGCCGGTGGATTCTTTTCCGGCGAGGAAT TAAGCGTGGTCGCTACTAGTGGTACTAGTAAGAACAATTGTCACGAGACCGAGGTAAGGCACGTGG CATGCACGTAAGGATGTTTCTGGTTGGGACTTCATTTTGCTGTCTCGGCCGTACACGTCCTAGAAT GGATCCACTACTACACATACGGCTAGCCAGCGCGCATGTTCCACTGTTCGCGGTGGGGTCTCCATT CAAAAGCGCGTGTGGACTTTGGGCAAAGCGAACGGGTGAAACATCTCGAGCTAGCTAATTACATAC TCATGTTTGTTGGACGGACAAATCTGGATTTACCGGCTAGTAGTGCAGAAGAAGTACATGGAAGAA AGTGACACATAAAAAAAGGCTACTAGTACCTTATTTTTCCTAGTAGGCTGTTGGTTGGAACAATAT GGAAGAAAGATGACGCCCAAAGAGCCTTTCTGGTCGACCTAAAACGTAGAAAACGAGCAACGCGTT TCACTTGTCGTGTCATGCAACGATATGTATATAAAAAGAGCCCCTTTGTGCTGACCATTGACAGGG TAGGTGACAACAAAACTAGCTACGTGCGCGCGTGCCGTCTGCGAGTCAATAAACCATTTCAGTTTC CCACGCTTGAGCGTACACGCTTGGACATTAACGCAAAAAGAAAAAGGATAGTAGCTGCTTGGAAAA TAGCGAGAAAAGACAGTGCAACTTAGAGGGGCGGTGAAAAAACGTGACTAGTGCTGAGTGGTGATG TCGCCTTCGCCTTTTCCTTTTGACAAAATGTGGCCGGTTATCTGGACGTGACGGTCACCGATACCA TATAAGTGTGCAAATAATCGACAGGACGGGTGGACGGACGCGGCACCACGTTAGAGATGGATGCCA ACGGGTTCCATGAAAGCAAATTTAGTGCTTGCCCATCACTGTTTAACACCCCACGAGGTTGAGGTT TTAA TTTAGTGCGTCCACATTTGTGATTACGCGGGGACTGGAAGCTTGGTGGAACTTTCGACCG GATATCTTTGTGTCCTCTTCTGGAAACCACTCTAGGAAATAGAGCTTCTTTTATTTATTTTTACGA AAAGGGCTCAGATCTATTATAGATGTTTTAAAAAATATAGGTTCTTAAAATTCATGACATGCACCT ATACAATGCACATTCATTCATCATAGTGAAAACCAATCTTCAATGAAAAGTGTCTACTAGAAAGTC CACTAAAGAATGAATTCTTGCAAAAAAAAAATCAAACAAAAGAGGTCATTTAACTTTTCATAATTA TCATTTTAATGTGCACATCGAATTGGAAATCCTATAGAAAACAAAGTCGCTAGCAACCGGTTTTTG TGCGAAGCTACCTTATTTGAAAAGTGGACGATGCTTCAGAAAGCATGGTCATTTTTTTTATCATCT ACTCCCTCCGTCCCATAATGTAAGATGTTACACTGTG
Metabolic Pathways
Description	loc_os09g28354.1:115.0)no description available & (at2g41690:95.9) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor B3 (HSFB3)
Function	DNA binding, sequence-specific DNA binding transcription factor activity
Involve In	response to cadmium ion
Located In	nucleus
Expressed In	inflorescence meristem, leaf whorl, flower, cultured cell
Expressed_During	4 anthesis, petal differentiation and expansion stage
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor B2A (TAIR:AT5G62020.1) Has 2046 Blast hits to 2034 proteins in 225 species: Archae - 0 Bacteria - 0 Metazoa - 329 Fungi - 465 Plants - 775 Viruses - 0 Other Eukaryotes - 477 (source: NCBI BLink). & (reliability: 188.8) & (original description: len=2541 path=[0:0-668 2:669-2058 5:2059-2115 7:2116-2177 9:2178-2273 10:2274-2305 11:2306-2540])