HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)



Sequence IdTRINITY_DN2937_c0_g1_i1
Heat Stress GenesA9
Ensembl Plants
New Transcript IdTraesCS7D02G367700.1
Functional Annotation
Gene ontologyXP_020148069.1
Protein family Detail
TypeDomain
Transcripts Per Million
TPM2.31
Fragments Per Kilobase of transcript per Million mapped reads
FPKM1.59
SequenceGGCGCCGGCCCCTCGTCTGCCGGGAATGCCCCCGCGCCGGTGGGTCCGGCGCCGAGGCCGCCGGAG
GTGGCGCCGTTCCTCACCAAGGTGTACGACATGGTGTCGGACGCGGCGACCGACAAGGTCATGTCG
TGGACCGACGCCGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGC
CGCCACTTCAAGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGGATTTCGTAAA
GTTGACCCTGATAGATGGGAGTGGGCCAATGAGGGGTTTCTTAGGGGCCAAAAGCATCTCCTGAAA
ATCATTAAGAGAAAGAAGAGACCTCAGGAAGCAAGTCGTGAGTTGGAGAAGGCACCTGTCAAAGCT
GCACCTGGTACTGAAAATATTGAAATAGGAAGATATGGTGGGCTTGTAAAGGAGGTGGAAACCCTT
AAGAGGGATAAAGCTCTTCTCATGAAGCAGCTTGTGGATCTCAGGCTCTACCAGCAAAGCTCTAAC
CTTGAAGTCCAGAGTTTGATTCAGCGCCTTCAAGTAATGGAACAGAACCAGAAGCAGATGATGGCA
CTTCTAGCAATCGTTGTCCAGAACCCTAGTCTTCTCAACCAGCTTGTGCAGCAGCAGCAGCAGCAG
CGCAGGAATAACTGCGTTTATGAGGATGGAAACAAGAAAAGGAGGTTCCCTGCTCTAGAGCAGGGT
CCAGTAACTGATCATGAGACTTCTGGCGCAGGGGCTGAAATTATTCAGTATCGGCCTCCTGTCCCT
GAAACTTCTAGCCAAGTAATAGCAGATGAAGCATTTTTGTCGGCCACTGCACAACCAATCCCTAGT
CCTGCACTTAACATGCCCATGGACATCGACACTCAAATGACCTCGGACAACCTCAACACACAAGGT
TCATCTGGGGACATTTTTGCTGACATGCCTGCTCTACCAGACTTTGAAGACATGCATCTGTGGTTT
ACCGAAGACGGGGAACCTACTTTAACTATTCAAG ATTATGATGAGTCTCCCCAGTCAGGGCAGG
ACTGTCAGATGGAAGCACAGCATAACTACAATAACCCTCAACATGGTATTCTCTAGTTTGATGTAT
GCCGAATGTTTCTGTTGTTCTTTTTCTGCAAATCGTGCAGACTGTATTCTATGTAGCTGCCAATTT
TGTATGTCCAATGACACACTATGCACTTCATGTGCACAAGTGGAGTTCAGATTAGTAGGATTTTGC
AAAGTTTATACCATGCCTTCTCCTTCAGATCG
Metabolic Pathways
Descriptionloc_os03g12370.2:395.0)no description available & (at5g16820:196.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes. heat shock factor 3 (HSF3)
Function-
Involve In-
Located In-
Expressed In-
Expressed_During-
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A1E (TAIR:AT3G02990.1) Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0 Bacteria - 23 Metazoa - 373 Fungi - 496 Plants - 855 Viruses - 0 Other Eukaryotes - 708 (source: NCBI BLink). & (reliability: 392.0) & (original description: len=1284 path=[0:0-252 1:253-1098 3:1099-1283])