HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN2937_c0_g1_i2
Heat Stress Genes A9
Ensembl Plants
New Transcript Id TraesCS7A02G355300.1
Functional Annotation
Gene ontology XP_020148069.1
Protein family Detail
Type Domain
Transcripts Per Million
TPM 3.83
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 2.64
Sequence GGCGCCGGCCCCTCGTCTGCCGGGAATGCCCCCGCGCCGGTGGGTCCGGCGCCGAGGCCGCCGGAG
GTGGCGCCGTTCCTCACCAAGGTGTACGACATGGTGTCGGACGCGGCGACCGACAAGGTCATGTCG
TGGACCGACGCCGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGC
CGCCACTTCAAGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGGATTTCGTAAA
GTTGACCCTGATAGATGGGAGTGGGCCAATGAGGGGTTTCTTAGGGGCCAAAAGCATCTCCTGAAA
ATCATTAAGAGAAAGAAGAGACCTCAGGAAGCAAGTCGTGAGTTGGAGAAGGCACCTGTCAAAGCT
GCACCTGGTACTGAAAATATTGAAATAGGAAGATATGGTGGGCTTGTAAAGGAGGTGGAAACCCTT
AAGAGGGATAAAGCTCTTCTCATGAAGCAGCTTGTGGATCTCAGGCTCTACCAGCAAAGCTCTAAC
CTTGAAGTCCAGAGTTTGATTCAGCGCCTTCAAGTAATGGAACAGAACCAGAAGCAGATGATGGCA
CTTCTAGCAATCGTTGTCCAGAACCCTAGTCTTCTCAACCAGCTTGTGCAGCAGCAGCAGCAGCAG
CGCAGGAATAACTGCGTTTATGAGGATGGAAACAAGAAAAGGAGGTTCCCTGCTCTAGAGCAGGGT
CCAGTAACTGATCATGAGACTTCTGGCGCAGGGGCTGAAATTATTCAGTATCGGCCTCCTGTCCCT
GAAACTTCTAGCCAAGTAATAGCAGATGAAGCATTTTTGTCGGCCACTGCACAACCAATCCCTAGT
CCTGCACTTAACATGCCCATGGACATCGACACTCAAATGACCTCGGACAACCTCAACACACAAGGT
TCATCTGGGGACATTTTTGCTGACATGCCTGCTCTACCAGACTTTGAAGACATGCATCTGTGGTTT
ACCGAAGACGGGGAACCTACTTTAACTATTCAAG ATTATGATGAGTCTCCCCAGTCAGGGCAGG
ACTGTCAGATGGAAGCACAGCATAACTACAATAACCCTCAACATGCTGATGCCATAACTGAAGCAT
AGATGGTGGTCTAGGAGCACATTGGGCAGCAACATTACATTAGGTTCGCGAGCTTTCGGGTGATCA
AAATATGGAGGCATGGTGATGTGTGAGGTGGGCGCCATTGGCAACGAAAACGGCATCTGTGCTCAG
AGTCATCAGAATGTCGTATAGCAATGCTCGAAAGACATTAACTGTCGTTGACTATACATGATTCTT
TTGTTGTTTTTCGGGCACAGGACAGGGATTTTTTGCGCAACCCTACTCTCCTTGTCCTTACAGTAG
TTAGCCAACAACATGAAATTCACTCAGTGTATATGCTGTTGTGTTTTGTAAATGTCAACCTGCTCT
GTACATTCTGTGAATTTCCAGCGAAAATGTAATGTTCCATTGACATTTGTGAAGCGGTTTTTAGTC
CTTGC
Metabolic Pathways
Description loc_os03g12370.1:404.0)no description available & (at5g16820:196.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes. heat shock factor 3 (HSF3)
Function -
Involve In -
Located In -
Expressed In -
Expressed_During -
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A1E (TAIR:AT3G02990.1) Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0 Bacteria - 23 Metazoa - 373 Fungi - 496 Plants - 855 Viruses - 0 Other Eukaryotes - 708 (source: NCBI BLink). & (reliability: 392.0) & (original description: len=1521 path=[0:0-252 1:253-1098 4:1099-1520])

Ensembl Plants
Sequence Id	TRINITY_DN2937_c0_g1_i2
Heat Stress Genes	A9
New Transcript Id	TraesCS7A02G355300.1
Functional Annotation
Gene ontology	XP_020148069.1
Protein family Detail
Type	Domain
Transcripts Per Million
TPM	3.83
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	2.64
Sequence	GGCGCCGGCCCCTCGTCTGCCGGGAATGCCCCCGCGCCGGTGGGTCCGGCGCCGAGGCCGCCGGAG GTGGCGCCGTTCCTCACCAAGGTGTACGACATGGTGTCGGACGCGGCGACCGACAAGGTCATGTCG TGGACCGACGCCGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGC CGCCACTTCAAGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGGATTTCGTAAA GTTGACCCTGATAGATGGGAGTGGGCCAATGAGGGGTTTCTTAGGGGCCAAAAGCATCTCCTGAAA ATCATTAAGAGAAAGAAGAGACCTCAGGAAGCAAGTCGTGAGTTGGAGAAGGCACCTGTCAAAGCT GCACCTGGTACTGAAAATATTGAAATAGGAAGATATGGTGGGCTTGTAAAGGAGGTGGAAACCCTT AAGAGGGATAAAGCTCTTCTCATGAAGCAGCTTGTGGATCTCAGGCTCTACCAGCAAAGCTCTAAC CTTGAAGTCCAGAGTTTGATTCAGCGCCTTCAAGTAATGGAACAGAACCAGAAGCAGATGATGGCA CTTCTAGCAATCGTTGTCCAGAACCCTAGTCTTCTCAACCAGCTTGTGCAGCAGCAGCAGCAGCAG CGCAGGAATAACTGCGTTTATGAGGATGGAAACAAGAAAAGGAGGTTCCCTGCTCTAGAGCAGGGT CCAGTAACTGATCATGAGACTTCTGGCGCAGGGGCTGAAATTATTCAGTATCGGCCTCCTGTCCCT GAAACTTCTAGCCAAGTAATAGCAGATGAAGCATTTTTGTCGGCCACTGCACAACCAATCCCTAGT CCTGCACTTAACATGCCCATGGACATCGACACTCAAATGACCTCGGACAACCTCAACACACAAGGT TCATCTGGGGACATTTTTGCTGACATGCCTGCTCTACCAGACTTTGAAGACATGCATCTGTGGTTT ACCGAAGACGGGGAACCTACTTTAACTATTCAAG ATTATGATGAGTCTCCCCAGTCAGGGCAGG ACTGTCAGATGGAAGCACAGCATAACTACAATAACCCTCAACATGCTGATGCCATAACTGAAGCAT AGATGGTGGTCTAGGAGCACATTGGGCAGCAACATTACATTAGGTTCGCGAGCTTTCGGGTGATCA AAATATGGAGGCATGGTGATGTGTGAGGTGGGCGCCATTGGCAACGAAAACGGCATCTGTGCTCAG AGTCATCAGAATGTCGTATAGCAATGCTCGAAAGACATTAACTGTCGTTGACTATACATGATTCTT TTGTTGTTTTTCGGGCACAGGACAGGGATTTTTTGCGCAACCCTACTCTCCTTGTCCTTACAGTAG TTAGCCAACAACATGAAATTCACTCAGTGTATATGCTGTTGTGTTTTGTAAATGTCAACCTGCTCT GTACATTCTGTGAATTTCCAGCGAAAATGTAATGTTCCATTGACATTTGTGAAGCGGTTTTTAGTC CTTGC
Metabolic Pathways
Description	loc_os03g12370.1:404.0)no description available & (at5g16820:196.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes. heat shock factor 3 (HSF3)
Function	-
Involve In	-
Located In	-
Expressed In	-
Expressed_During	-
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor A1E (TAIR:AT3G02990.1) Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0 Bacteria - 23 Metazoa - 373 Fungi - 496 Plants - 855 Viruses - 0 Other Eukaryotes - 708 (source: NCBI BLink). & (reliability: 392.0) & (original description: len=1521 path=[0:0-252 1:253-1098 4:1099-1520])