HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN2937_c0_g1_i3
Heat Stress Genes A9
Ensembl Plants
New Transcript Id TraesCSU02G127200.1
Functional Annotation
Gene ontology XP_020148069.1
Protein family Detail
Type Domain
Transcripts Per Million
TPM 2.26
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 1.56
Sequence GGCGCCGGCCCCTCGTCTGCCGGGAATGCCCCCGCGCCGGTGGGTCCGGCGCCGAGGCCGCCGGAG
GTGGCGCCGTTCCTCACCAAGGTGTACGACATGGTGTCGGACGCGGCGACCGACAAGGTCATGTCG
TGGACCGACGCCGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGC
CGCCACTTCAAGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGTGAGATTCCCT
CTGCCTCCTCGCTTGTTTCCGGTGCGAGCCGTTTTTTTCTTTTTGCGTGTGATTTTGAGTTGAATT
GGATGCAATTGCTATCGCGGAGCATATGTTTCCTTTATTATAATTTCG
Metabolic Pathways
Description loc_os03g12370.3:100.0)no description available & (at2g26150:90.5) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2 (HSFA2)
Function DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity
Involve In in 7 processes
Located In endomembrane system, nucleus
Expressed In 8 plant structures
Expressed_During 4 anthesis, C globular stage, petal differentiation and expansion stage
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A1D (TAIR:AT1G32330.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.0) & (original description: len=378 path=[0:0-252 2:253-377])

Ensembl Plants
Sequence Id	TRINITY_DN2937_c0_g1_i3
Heat Stress Genes	A9
New Transcript Id	TraesCSU02G127200.1
Functional Annotation
Gene ontology	XP_020148069.1
Protein family Detail
Type	Domain
Transcripts Per Million
TPM	2.26
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	1.56
Sequence	GGCGCCGGCCCCTCGTCTGCCGGGAATGCCCCCGCGCCGGTGGGTCCGGCGCCGAGGCCGCCGGAG GTGGCGCCGTTCCTCACCAAGGTGTACGACATGGTGTCGGACGCGGCGACCGACAAGGTCATGTCG TGGACCGACGCCGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGC CGCCACTTCAAGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGTGAGATTCCCT CTGCCTCCTCGCTTGTTTCCGGTGCGAGCCGTTTTTTTCTTTTTGCGTGTGATTTTGAGTTGAATT GGATGCAATTGCTATCGCGGAGCATATGTTTCCTTTATTATAATTTCG
Metabolic Pathways
Description	loc_os03g12370.3:100.0)no description available & (at2g26150:90.5) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2 (HSFA2)
Function	DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity
Involve In	in 7 processes
Located In	endomembrane system, nucleus
Expressed In	8 plant structures
Expressed_During	4 anthesis, C globular stage, petal differentiation and expansion stage
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor A1D (TAIR:AT1G32330.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.0) & (original description: len=378 path=[0:0-252 2:253-377])