HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN32260_c0_g1_i1
Heat Stress Genes A2b
Ensembl Plants
New Transcript Id TraesCSU02G127300.1
Functional Annotation
Gene ontology EMS67930.1
Protein family Detail
Type -
Transcripts Per Million
TPM 3.33
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 2.3
Sequence GGGAGGTCTTCGACGTCTGATGTTCTTCAGAAGGTGCCTCTGTCCCCGTAGAAAACCCTCATTGGC
AAACTCCCATCGATCAGGATCCACCTTTCTGAAACCATAGGTGTTGAGCTGCTTGACAAAGCTGGT
GAAGTTGCTGTGCTTGAAGTGCCTCGGCAGCAGCACTGTGGAGAAGTGGTGCAGATCCCACACGAC
GAGGCTGTTATTGCCAGCGCTCCACGACACGACGTCGTCGGTGCTCCGGTCATCGACCATGTCGTA
CGTCTTTGTCAGGAACAGCGACGGCCTGGCATCGCGCAGCCCCTTCACCGGCCTCGATGCCGAAGT
GGCCCCCGGCGATTCGCCTGTCCCATCGCCATCCTCCTCCTCCACCTTGACCAGAGTCGGCATTGG
GTCCATACACCCAAACCCCAAGAACCCTCCCAACCAAGGGACCACACCAAAACCCTCCT
Metabolic Pathways
Description loc_os07g08140.1 : 191.0) no description available & (at2g26150 : 180.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2 (HSFA2)
Function DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity
Involve In in 7 processes
Located In endomembrane system, nucleus
Expressed In 8 plant structures
Expressed_During 4 anthesis, C globular stage, petal differentiation and expansion stage
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A1D (TAIR:AT1G32330.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 360.0) & (original description: len=455 path=[0:0-454])

Ensembl Plants
Sequence Id	TRINITY_DN32260_c0_g1_i1
Heat Stress Genes	A2b
New Transcript Id	TraesCSU02G127300.1
Functional Annotation
Gene ontology	EMS67930.1
Protein family Detail
Type	-
Transcripts Per Million
TPM	3.33
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	2.3
Sequence	GGGAGGTCTTCGACGTCTGATGTTCTTCAGAAGGTGCCTCTGTCCCCGTAGAAAACCCTCATTGGC AAACTCCCATCGATCAGGATCCACCTTTCTGAAACCATAGGTGTTGAGCTGCTTGACAAAGCTGGT GAAGTTGCTGTGCTTGAAGTGCCTCGGCAGCAGCACTGTGGAGAAGTGGTGCAGATCCCACACGAC GAGGCTGTTATTGCCAGCGCTCCACGACACGACGTCGTCGGTGCTCCGGTCATCGACCATGTCGTA CGTCTTTGTCAGGAACAGCGACGGCCTGGCATCGCGCAGCCCCTTCACCGGCCTCGATGCCGAAGT GGCCCCCGGCGATTCGCCTGTCCCATCGCCATCCTCCTCCTCCACCTTGACCAGAGTCGGCATTGG GTCCATACACCCAAACCCCAAGAACCCTCCCAACCAAGGGACCACACCAAAACCCTCCT
Metabolic Pathways
Description	loc_os07g08140.1 : 191.0) no description available & (at2g26150 : 180.0) member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2 (HSFA2)
Function	DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity
Involve In	in 7 processes
Located In	endomembrane system, nucleus
Expressed In	8 plant structures
Expressed_During	4 anthesis, C globular stage, petal differentiation and expansion stage
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor A1D (TAIR:AT1G32330.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 360.0) & (original description: len=455 path=[0:0-454])