HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN47857_c0_g1_i1
Heat Stress Genes C1b
Ensembl Plants
New Transcript Id TraesCS7D02G435700.1
Functional Annotation
Gene ontology AHZ44773.1
Protein family Detail
Type -
Transcripts Per Million
TPM 8.54
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 5.89
Sequence CGTGCGCGAACTCCCACACGTCCGGGTCAACCTTGCGAAAACCGTAGGTGTTGAGCTGCCGGACGA
AGCTGGCGAAGTTGCGGTGCTTGAAGTAGGAGGGGAGGAGGAAGTCGGAGAAGGCGGCGGGGTCGA
GGACGAGGAACGTGTTGCTGGCGCCGCCCCAGCACACCACGGCGTCCGTGGCCGGGTCGCTGACCA
TGTGGAACGTCTTGGCCACGAACGGCGCCACGCCGCCGTCGTCCTGCGGCTGGTGGCCCTTGCACT
CGCTTCCCATGGACGAAGAGGCTGCGACCGGATAAGGAAGCCGCTCGCTGTTCCTGCTCTGCTCGG
TGTGGGCTTGTTGTTCTCTGTGGTGAGTCACTCCTTCCTACTACCAACGTGTGTGTGTGCCCGCGC
GCAGATATTTCGCTTCCGGGCGGTGACGCTTT
Metabolic Pathways
Description loc_os01g53220.1:164.0)no description available & (at3g24520:117.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor C1 (HSFC1)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In regulation of transcription, DNA-dependent
Located In nucleus
Expressed In 14 plant structures
Expressed_During LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Interferon induced 35kDa, N-terminal (InterPro:IPR009938), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock factor 1 (TAIR:AT4G17750.1) Has 2230 Blast hits to 2217 proteins in 240 species: Archae - 2 Bacteria - 4 Metazoa - 382 Fungi - 481 Plants - 788 Viruses - 0 Other Eukaryotes - 573 (source: NCBI BLink). & (reliability: 234.0) & (original description: len=428 path=[0:0-427])

Ensembl Plants
Sequence Id	TRINITY_DN47857_c0_g1_i1
Heat Stress Genes	C1b
New Transcript Id	TraesCS7D02G435700.1
Functional Annotation
Gene ontology	AHZ44773.1
Protein family Detail
Type	-
Transcripts Per Million
TPM	8.54
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	5.89
Sequence	CGTGCGCGAACTCCCACACGTCCGGGTCAACCTTGCGAAAACCGTAGGTGTTGAGCTGCCGGACGA AGCTGGCGAAGTTGCGGTGCTTGAAGTAGGAGGGGAGGAGGAAGTCGGAGAAGGCGGCGGGGTCGA GGACGAGGAACGTGTTGCTGGCGCCGCCCCAGCACACCACGGCGTCCGTGGCCGGGTCGCTGACCA TGTGGAACGTCTTGGCCACGAACGGCGCCACGCCGCCGTCGTCCTGCGGCTGGTGGCCCTTGCACT CGCTTCCCATGGACGAAGAGGCTGCGACCGGATAAGGAAGCCGCTCGCTGTTCCTGCTCTGCTCGG TGTGGGCTTGTTGTTCTCTGTGGTGAGTCACTCCTTCCTACTACCAACGTGTGTGTGTGCCCGCGC GCAGATATTTCGCTTCCGGGCGGTGACGCTTT
Metabolic Pathways
Description	loc_os01g53220.1:164.0)no description available & (at3g24520:117.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor C1 (HSFC1)
Function	DNA binding, sequence-specific DNA binding transcription factor activity
Involve In	regulation of transcription, DNA-dependent
Located In	nucleus
Expressed In	14 plant structures
Expressed_During	LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Interferon induced 35kDa, N-terminal (InterPro:IPR009938), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock factor 1 (TAIR:AT4G17750.1) Has 2230 Blast hits to 2217 proteins in 240 species: Archae - 2 Bacteria - 4 Metazoa - 382 Fungi - 481 Plants - 788 Viruses - 0 Other Eukaryotes - 573 (source: NCBI BLink). & (reliability: 234.0) & (original description: len=428 path=[0:0-427])