HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

Home

Sequence Id TRINITY_DN7294_c1_g1_i1
Heat Stress Genes B2B
Ensembl Plants
New Transcript Id TraesCS7D02G367700.1
Functional Annotation
Gene ontology BAJ89087.1
Protein family Detail
Type -
Transcripts Per Million
TPM 2.26
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 1.56
Sequence CGATCTTTCCTTTCCTGTGCAACCAAACCAAATCTCCCCGTCTCCTCTCGCCAGAGCACCACCAGA
ACCATCACCCTCAACCAACTCATCAATGGCGTCGCCGGCGCTGGGGGCGGGGACGCCGCCGTTCCT
CACCAAGACGTACGCGATGGTGGACGACCCGGAGACCGACGACACCATCTCCTGGAACGAGTCCGG
CACGGCGTTCGTGGTGTGGCGCCGCGCCGAGTTCGAGCGCGACCTCCTCCCCAAGAACTTCAAGCA
CAGCAACTTCGCCTCCTTCGTCCGCCAGCTCAACACCTACGGATTCAGGAAGATAGGACTTGACAG
GTGGGAG
Metabolic Pathways
Description loc_os04g48030.1 : 145.0) no description available & (at4g11660 : 119.0) member of Heat Stress Transcription Factor (Hsf) family AT-HSFB2B
Function transcription repressor activity, sequence-specific DNA binding transcription factor activity
Involve In response to chitin
Located In nucleus 24 plant structures
Expressed In -
Expressed_During 14 growth stages
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor B2A (TAIR:AT5G62020.1) Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36 Bacteria - 10454 Metazoa - 9035 Fungi - 1651 Plants - 6330 Viruses - 666 Other Eukaryotes - 4304 (source: NCBI BLink). & (reliability: 238.0) & (original description: len=337 path=[1:0-119 2:120-145 3:146-278 8:279-302 10:303-336])

Ensembl Plants
Sequence Id	TRINITY_DN7294_c1_g1_i1
Heat Stress Genes	B2B
New Transcript Id	TraesCS7D02G367700.1
Functional Annotation
Gene ontology	BAJ89087.1
Protein family Detail
Type	-
Transcripts Per Million
TPM	2.26
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	1.56
Sequence	CGATCTTTCCTTTCCTGTGCAACCAAACCAAATCTCCCCGTCTCCTCTCGCCAGAGCACCACCAGA ACCATCACCCTCAACCAACTCATCAATGGCGTCGCCGGCGCTGGGGGCGGGGACGCCGCCGTTCCT CACCAAGACGTACGCGATGGTGGACGACCCGGAGACCGACGACACCATCTCCTGGAACGAGTCCGG CACGGCGTTCGTGGTGTGGCGCCGCGCCGAGTTCGAGCGCGACCTCCTCCCCAAGAACTTCAAGCA CAGCAACTTCGCCTCCTTCGTCCGCCAGCTCAACACCTACGGATTCAGGAAGATAGGACTTGACAG GTGGGAG
Metabolic Pathways
Description	loc_os04g48030.1 : 145.0) no description available & (at4g11660 : 119.0) member of Heat Stress Transcription Factor (Hsf) family AT-HSFB2B
Function	transcription repressor activity, sequence-specific DNA binding transcription factor activity
Involve In	response to chitin
Located In	nucleus 24 plant structures
Expressed In	-
Expressed_During	14 growth stages
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor B2A (TAIR:AT5G62020.1) Has 32476 Blast hits to 10764 proteins in 847 species: Archae - 36 Bacteria - 10454 Metazoa - 9035 Fungi - 1651 Plants - 6330 Viruses - 666 Other Eukaryotes - 4304 (source: NCBI BLink). & (reliability: 238.0) & (original description: len=337 path=[1:0-119 2:120-145 3:146-278 8:279-302 10:303-336])