HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN7294_c1_g1_i3
Heat Stress Genes A6B
Ensembl Plants
New Transcript Id TraesCS7D02G367700.1
Functional Annotation
Gene ontology AKE31887.1
Protein family Detail
Type -
Transcripts Per Million
TPM 2.39
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 1.65
Sequence CGATCTTTCCTTTCCTGTGCAACCAAACCAAATCTCCCCGTCTCCTCTCGCCAGAGCACCACCAGA
ACCATCACCCTCAACCAACTCATCAATGGCGTCGCCGGCGCTGGGGGCGGGGACGCCGCCGTTCCT
CACCAAGACGTACGACCTGGTGGAGGACCCGGCCACGGACCAGGTCGTGTCCTGGGGCCGCGCCGG
CAACACCTTCGTCGTCTGGGACCCGCACGTCTTCGCCGAGGCCCTGCTCCCGCGCCTCTTCAAGCA
CTCCAACTTCTCCAGCTTCGTCCGCCAGCTCAACACCTATGGCTTCCGCAAGGTGGATCCGGACCG
GTGGGAGTTCGCCCACGGCTCCTTCCTCCGGGGCCAGACGCACCTCCTGCGCAACATCGTCCGCCG
TG
Metabolic Pathways
Description loc_os10g28340.3 : 173.0) no description available & (at3g22830 : 157.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In regulation of transcription, DNA-dependent
Located In nucleus
Expressed In root
Expressed_During
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 312.0) & (original description: len=398 path=[1:0-119 2:120-145 4:146-146 6:147-266 7:267-278 8:279-302 9:303-397])

Ensembl Plants
Sequence Id	TRINITY_DN7294_c1_g1_i3
Heat Stress Genes	A6B
New Transcript Id	TraesCS7D02G367700.1
Functional Annotation
Gene ontology	AKE31887.1
Protein family Detail
Type	-
Transcripts Per Million
TPM	2.39
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	1.65
Sequence	CGATCTTTCCTTTCCTGTGCAACCAAACCAAATCTCCCCGTCTCCTCTCGCCAGAGCACCACCAGA ACCATCACCCTCAACCAACTCATCAATGGCGTCGCCGGCGCTGGGGGCGGGGACGCCGCCGTTCCT CACCAAGACGTACGACCTGGTGGAGGACCCGGCCACGGACCAGGTCGTGTCCTGGGGCCGCGCCGG CAACACCTTCGTCGTCTGGGACCCGCACGTCTTCGCCGAGGCCCTGCTCCCGCGCCTCTTCAAGCA CTCCAACTTCTCCAGCTTCGTCCGCCAGCTCAACACCTATGGCTTCCGCAAGGTGGATCCGGACCG GTGGGAGTTCGCCCACGGCTCCTTCCTCCGGGGCCAGACGCACCTCCTGCGCAACATCGTCCGCCG TG
Metabolic Pathways
Description	loc_os10g28340.3 : 173.0) no description available & (at3g22830 : 157.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function	DNA binding, sequence-specific DNA binding transcription factor activity
Involve In	regulation of transcription, DNA-dependent
Located In	nucleus
Expressed In	root
Expressed_During
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 312.0) & (original description: len=398 path=[1:0-119 2:120-145 4:146-146 6:147-266 7:267-278 8:279-302 9:303-397])