HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)



Sequence IdTRINITY_DN7294_c1_g4_i2
Heat Stress GenesA6B
Ensembl Plants
New Transcript IdTraesCSU02G095900.3
Functional Annotation
Gene ontologyBAJ86159.1
Protein family Detail
Type-
Transcripts Per Million
TPM6.43
Fragments Per Kilobase of transcript per Million mapped reads
FPKM4.44
SequenceATTGTGTGAAGTATGCCATGTTAGTTGAGCTTTGCTGCTTGTGGCTTGTGAACTTGAGCTAACTGC
AGTTGTTCTGCTACTCTTTGTGCTTCTCGAAACTAAAATAAATATGTGACTTATTCTGCAATCTGC
AGGGTTTTAGAAAGATCGATCCAGACAGATGGGAATTTGCAAACGAGGGTTTCATTAGGGGCCAGA
GACAGCTTCTGAAGATGATAAAGAGAAGGAGACCATTGTCCTATCTCCCTTCACCACAACATCAGG
CCCTTGGCTCCTGCCTCGAGGTCGGCCAGTTCGGATTCGACGAAGAAATCGAAGTGCTAAGGCGCG
ACAAGAACGCCTTACTCGCAGAGGTGGTGAAACTGAGGCAGGAGCAGCAGAGCACCAGAGCTGACA
TGCGAGCCATGGAAGAGAGGCTGCACCACGTCGAGCAGAAGCAGCTCCAGATGATGGGTTTCCTGG
CAAGAGCGATACAGAACCCTGACTTCTTTCTCCAGTTGATCCAGCAACAAGATAAACTGAAGGACC
TCGAGGACGCTTACCCGACGAAGAGGAGGAGGCCCATCGACGTAATGCCGTTCCTTGGCCCTGAGG
GGACCAGTCAGAGTGAGCCACTCGAGTCCACATTCATATTTGAGGACAGGGAATTTTCAGAGCTGG
AGAATTTAGCCATGAACATTCAGGGGATCAGGAAGGGCATGGAGGATGACAGAAGTGGTCGGAATC
AGGGCCGCGGTGAGGCCGAGCTGACTGACGACTTCTGGGAGGAGCTGCTGAGTGAAGGAATGAGGG
ATGAAGCTGAGATTTTAGAGCTGGAAAGGAGCAGATCTAGATATGTCGACGCGTAGCGCACTAGCT
GGGTCATCTACTAGAATTCATAACCATTTAATATATATACCATTGTATTGATAGCTACTATAAAGT
TAGTACAAAGTTGAGTCATTTATTTTGAAACGGAAGGAGTACGTGATAACAAACAAATACATAAAT
GAAAATGGGCCAATCTTGTTCTATTGTTG
Metabolic Pathways
Descriptionloc_os03g06630.1:296.0)no description available & (at3g22830:154.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In regulation of transcription, DNA-dependent
Located In nucleus
Expressed In root
Expressed_During-
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 278.0) & (original description: len=1019 path=[0:0-1018])