HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN7522_c0_g1_i2
Heat Stress Genes A2e
Ensembl Plants
New Transcript Id TraesCS7D02G270600.2
Functional Annotation
Gene ontology XP_020187328.1
Protein family Detail
Type -
Transcripts Per Million
TPM 1.02
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 0.7
Sequence CACGGATTAATGCTGTCTTACTTATGATGAACTGGGTTAATGTGAAGAACTTTAGATACCAATTCC
TTAGTGGGGAATACAGGATACACTGCAAAGCTTCCCAAAGCAACTAGTTGCCTAAAAGAAGATGGT
AGCAAGTATACATTATACATATTACAGACACAACAGAATACTGTACATCGATATCATCCAGATACA
ATCGCTGCACACATACGTGCTATATACTGGGTACTATCATATTTATTCTCATACGGATGACACAAA
CTAGCAGAAAACTAGATGGATACAGGCATACAGCCCAATCCGACTAAAATCTTTGCACAGCAGACA
CTGGCAGATAGATGATCCCTGGTAATCACAAGCAACCCAACTAGAATCGTCCCAGAAGTTGAACCA
AACACGGCATTGACGAAAATAAGACCGACGCTAAGATAATATCGTAGCATCATCACCAAAGGCACC
AGTGATCTACTCGACTGACTGAACATGACCGACACGGATATATATATACATATATAACAACAGGCA
TTCTGGTAAGGATTCTCAGGGCTGCTCGGCGATAGAATGCAATGGATTATTGTCTGGAATTCGCGT
TCTTTGAGTCGAGCTAGTCCAGCTTCTCAGCCAACAAGTTCATGTCATCTGGAACCACAAGGTTGC
TGGCCTCCTCGCCGAGCCCCCCTTCATGCAACAGGTCCTCCCAGAAATCATCATTTAGCTCTCCAC
TGGGCCTGCCTCTCAGTTGCTCCGAACGGCTGGAAGCGACACTCTGCTGCACCTCAGCCCCCTTTG
TATCGACGGACGAGCTTTCAAGATCGGATATGACACCGTTCACGAGCGAGTCCACTGGCTCCTGCT
GCTCAAACATTACCTGTGACCCTTGCTCGAGGGTAGAGCCAGTGCCCATGCTATCGACAGCTTCAG
GTCCCTGGTCGATGCGGCGCCGTCTTTTATTTGAGATGGCATCTTCGAGCTCCTTCCTCATCTCAC
TCTGGGAGATCAGCTGGCGTATGAACACAGGATT CTGCATGACTCGCGCCAAGAACGACATCAT
CTGCTGTTGCTTCTGCTCGGTTCCTTGCAGCCTCTTTTCCATGGCTTGCAGACCTGACCTTGTGTT
CTGTTGCTCCTGCCTGAGCTTCACCACTTCAGCCATCAAGAGCTGCTTGTCCCTTTTCAGCTGATC
TATCTCCACGTCATGTCCAAAGTTCCCCACCTCAAGGTAAGAGCCAAGAGATTGCTGATTCTGAGA
CCCATGTGTAGGTTTCCGGCGCTTAATATTTCTGAGGAGGTGCCTCTGCCCTCGCAAGAATCCCTC
ATTTGCAAATTCCCACCTGTCAGGATCCACCTTTCTGAAGCCATAGGTGTTGAGCTGTCGGACGAA
GCTGGAGAAGTTGCTGTGCTTGAAGTACCTCGGCAGCAGCAGGG
Metabolic Pathways
Description loc_os03g58160.1:385.0)no description available & (at3g22830:234.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In regulation of transcription, DNA-dependent
Located In nucleus
Expressed In root
Expressed_During -
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 468.0) & (original description: len=1428 path=[1:0-168 2:169-200 3:201-621 5:622-1359 7:1360-1427])

Ensembl Plants
Sequence Id	TRINITY_DN7522_c0_g1_i2
Heat Stress Genes	A2e
New Transcript Id	TraesCS7D02G270600.2
Functional Annotation
Gene ontology	XP_020187328.1
Protein family Detail
Type	-
Transcripts Per Million
TPM	1.02
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	0.7
Sequence	CACGGATTAATGCTGTCTTACTTATGATGAACTGGGTTAATGTGAAGAACTTTAGATACCAATTCC TTAGTGGGGAATACAGGATACACTGCAAAGCTTCCCAAAGCAACTAGTTGCCTAAAAGAAGATGGT AGCAAGTATACATTATACATATTACAGACACAACAGAATACTGTACATCGATATCATCCAGATACA ATCGCTGCACACATACGTGCTATATACTGGGTACTATCATATTTATTCTCATACGGATGACACAAA CTAGCAGAAAACTAGATGGATACAGGCATACAGCCCAATCCGACTAAAATCTTTGCACAGCAGACA CTGGCAGATAGATGATCCCTGGTAATCACAAGCAACCCAACTAGAATCGTCCCAGAAGTTGAACCA AACACGGCATTGACGAAAATAAGACCGACGCTAAGATAATATCGTAGCATCATCACCAAAGGCACC AGTGATCTACTCGACTGACTGAACATGACCGACACGGATATATATATACATATATAACAACAGGCA TTCTGGTAAGGATTCTCAGGGCTGCTCGGCGATAGAATGCAATGGATTATTGTCTGGAATTCGCGT TCTTTGAGTCGAGCTAGTCCAGCTTCTCAGCCAACAAGTTCATGTCATCTGGAACCACAAGGTTGC TGGCCTCCTCGCCGAGCCCCCCTTCATGCAACAGGTCCTCCCAGAAATCATCATTTAGCTCTCCAC TGGGCCTGCCTCTCAGTTGCTCCGAACGGCTGGAAGCGACACTCTGCTGCACCTCAGCCCCCTTTG TATCGACGGACGAGCTTTCAAGATCGGATATGACACCGTTCACGAGCGAGTCCACTGGCTCCTGCT GCTCAAACATTACCTGTGACCCTTGCTCGAGGGTAGAGCCAGTGCCCATGCTATCGACAGCTTCAG GTCCCTGGTCGATGCGGCGCCGTCTTTTATTTGAGATGGCATCTTCGAGCTCCTTCCTCATCTCAC TCTGGGAGATCAGCTGGCGTATGAACACAGGATT CTGCATGACTCGCGCCAAGAACGACATCAT CTGCTGTTGCTTCTGCTCGGTTCCTTGCAGCCTCTTTTCCATGGCTTGCAGACCTGACCTTGTGTT CTGTTGCTCCTGCCTGAGCTTCACCACTTCAGCCATCAAGAGCTGCTTGTCCCTTTTCAGCTGATC TATCTCCACGTCATGTCCAAAGTTCCCCACCTCAAGGTAAGAGCCAAGAGATTGCTGATTCTGAGA CCCATGTGTAGGTTTCCGGCGCTTAATATTTCTGAGGAGGTGCCTCTGCCCTCGCAAGAATCCCTC ATTTGCAAATTCCCACCTGTCAGGATCCACCTTTCTGAAGCCATAGGTGTTGAGCTGTCGGACGAA GCTGGAGAAGTTGCTGTGCTTGAAGTACCTCGGCAGCAGCAGGG
Metabolic Pathways
Description	loc_os03g58160.1:385.0)no description available & (at3g22830:234.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function	DNA binding, sequence-specific DNA binding transcription factor activity
Involve In	regulation of transcription, DNA-dependent
Located In	nucleus
Expressed In	root
Expressed_During	-
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 468.0) & (original description: len=1428 path=[1:0-168 2:169-200 3:201-621 5:622-1359 7:1360-1427])