HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN7522_c0_g1_i3
Heat Stress Genes A2e
Ensembl Plants
New Transcript Id TraesCS5D02G445100.1
Functional Annotation
Gene ontology XP_020187328.1
Protein family Detail
Type -
Transcripts Per Million
TPM 0.54
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 0.37
Sequence ACTTATGATGAACTTCCGTAATGTGAGGAAATTTAGGTACGAATTCCTTGGTGGGGAACACATGAT
ACAGCACAAAGCCTCCGAAAGTAAGCAAACAAGTACAGTTGCCTAAAAAACATGGTAATAAGGAGT
ACATTATACATAGACACAACAGGATACTGTACATCGATATCATCCAGATACAATCACTGCAGATAT
AGGTGCTATATACTGGGTACTATCCTATTTATTTCTCATACTGATACTGACAATGCCAATACACAC
GAGCTAGCAGAAACACTGCAGTTCGTTAGACCGACAGTAGCTAGCAGAAATACTGATACCAACTAG
AATCCTCCGGAAAGCTGAACTAAAACACGGCAATGACGAAAATAAGACCGACACCAAGATAATATG
GTAGCATCATCACCAAAGGCGGCAGTGATCTACTCGACTGACTGATCATGGCCGACATGGACATAT
ATATACACATATATAACAACAGGCTTGCTGGTAAGGATTCTCGGGGCTGCTCGGCGATAGATTACT
GTCCAGACTTTGTGTTCTTCAAGTGGAGCTAGTCCATCTTCTGAGCCAACAAGTTCATGTCATCTG
GAACCACAAGGTTGCTGGCCTCCTCGCCGAGCCCCCCTTCATGCAACAGGTCCTCCCAGAAATCAT
CATTTAGCTCTCCACTGGGCCTGCCTCTCAGTTGCTCCGAACGGCTGGAAGCGACACTCTGCTGCA
CCTCAGCCCCCTTTGTATCGACGGACGAGCTTTCAAGATCGGATATGACACCGTTCACGAGCGAGT
CCACTGGCTCCTGCTGCTCAAACATTACCTGTGACCCTTGCTCGAGGGTAGAGCCAGTGCCCATGC
TATCGACAGCTTCAGGTCCCTGGTCGATGCGGCGCCGTCTTTTATTTGAGATGGCATCTTCGAGCT
CCTTCCTCATCTCACTCTGGGAGATCAGCTGGCGTATGAACACAGGATTCTGCATGACTCGCGCCA
AGAACGACATCATCTGCTGTTGCTTCTGCTCGGT TCCTTGCAGCCTCTTTTCCATGGCTTGCAG
ACCTGACCTTGTGTTCTGTTGCTCCTGCCTGAGCTTCACCACTTCAGCCATCAAGAGCTGCTTGTC
CCTTTTCAGCTGATCTATCTCCACGTCATGTCCAAAGTTCCCCACCTCAAGGTAAGAGCCAAGAGA
TTGCTGATTCTGAGACCCATGTGTAGGTTTCCGGCGCTTAATATTTCTGAGGAGGTGCCTCTGCCC
TCGCAAGAATCCCTCATTTGCAAATTCCCACCTGTCAGGATCCACCTTTCTGAAGCCCTGCCAAAG
GCAATAACAACCATGTCGGAAATCGGATAATTAAATAAGGCAAAAAGATC
Metabolic Pathways
Description loc_os03g58160.1:346.0)no description available & (at3g22830:193.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In regulation of transcription, DNA-dependent
Located In nucleus
Expressed In root
Expressed_During -
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 386.0) & (original description: len=1368 path=[0:0-154 2:155-186 4:187-570 5:571-1308 6:1309-1367])

Ensembl Plants
Sequence Id	TRINITY_DN7522_c0_g1_i3
Heat Stress Genes	A2e
New Transcript Id	TraesCS5D02G445100.1
Functional Annotation
Gene ontology	XP_020187328.1
Protein family Detail
Type	-
Transcripts Per Million
TPM	0.54
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	0.37
Sequence	ACTTATGATGAACTTCCGTAATGTGAGGAAATTTAGGTACGAATTCCTTGGTGGGGAACACATGAT ACAGCACAAAGCCTCCGAAAGTAAGCAAACAAGTACAGTTGCCTAAAAAACATGGTAATAAGGAGT ACATTATACATAGACACAACAGGATACTGTACATCGATATCATCCAGATACAATCACTGCAGATAT AGGTGCTATATACTGGGTACTATCCTATTTATTTCTCATACTGATACTGACAATGCCAATACACAC GAGCTAGCAGAAACACTGCAGTTCGTTAGACCGACAGTAGCTAGCAGAAATACTGATACCAACTAG AATCCTCCGGAAAGCTGAACTAAAACACGGCAATGACGAAAATAAGACCGACACCAAGATAATATG GTAGCATCATCACCAAAGGCGGCAGTGATCTACTCGACTGACTGATCATGGCCGACATGGACATAT ATATACACATATATAACAACAGGCTTGCTGGTAAGGATTCTCGGGGCTGCTCGGCGATAGATTACT GTCCAGACTTTGTGTTCTTCAAGTGGAGCTAGTCCATCTTCTGAGCCAACAAGTTCATGTCATCTG GAACCACAAGGTTGCTGGCCTCCTCGCCGAGCCCCCCTTCATGCAACAGGTCCTCCCAGAAATCAT CATTTAGCTCTCCACTGGGCCTGCCTCTCAGTTGCTCCGAACGGCTGGAAGCGACACTCTGCTGCA CCTCAGCCCCCTTTGTATCGACGGACGAGCTTTCAAGATCGGATATGACACCGTTCACGAGCGAGT CCACTGGCTCCTGCTGCTCAAACATTACCTGTGACCCTTGCTCGAGGGTAGAGCCAGTGCCCATGC TATCGACAGCTTCAGGTCCCTGGTCGATGCGGCGCCGTCTTTTATTTGAGATGGCATCTTCGAGCT CCTTCCTCATCTCACTCTGGGAGATCAGCTGGCGTATGAACACAGGATTCTGCATGACTCGCGCCA AGAACGACATCATCTGCTGTTGCTTCTGCTCGGT TCCTTGCAGCCTCTTTTCCATGGCTTGCAG ACCTGACCTTGTGTTCTGTTGCTCCTGCCTGAGCTTCACCACTTCAGCCATCAAGAGCTGCTTGTC CCTTTTCAGCTGATCTATCTCCACGTCATGTCCAAAGTTCCCCACCTCAAGGTAAGAGCCAAGAGA TTGCTGATTCTGAGACCCATGTGTAGGTTTCCGGCGCTTAATATTTCTGAGGAGGTGCCTCTGCCC TCGCAAGAATCCCTCATTTGCAAATTCCCACCTGTCAGGATCCACCTTTCTGAAGCCCTGCCAAAG GCAATAACAACCATGTCGGAAATCGGATAATTAAATAAGGCAAAAAGATC
Metabolic Pathways
Description	loc_os03g58160.1:346.0)no description available & (at3g22830:193.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B (HSFA6B)
Function	DNA binding, sequence-specific DNA binding transcription factor activity
Involve In	regulation of transcription, DNA-dependent
Located In	nucleus
Expressed In	root
Expressed_During	-
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	heat shock transcription factor A2 (TAIR:AT2G26150.1) Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0 Bacteria - 17 Metazoa - 509 Fungi - 485 Plants - 797 Viruses - 4 Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 386.0) & (original description: len=1368 path=[0:0-154 2:155-186 4:187-570 5:571-1308 6:1309-1367])