HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN7730_c0_g1_i1
Heat Stress Genes A4b
Ensembl Plants
New Transcript Id TraesCS7D02G270600.1
Functional Annotation
Gene ontology XP_020165982.1
Protein family Detail
Type -
Transcripts Per Million
TPM 5.13
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 3.54
Sequence CGATCTCTGCCGGGATCTTCTCCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTTGTGCGCCA
GCTCAACACCTACGGCTTTAGGAAGGTAGATCCAGAACAATGGGAATTTGCAAATGAAGAATTCAT
ACGAGACCAGCGGCATCGGTTGAAAAATATCCATAGACGCAAGCCAATATTCAGCCATTCATCACA
TACTCAGGGTGCCGGACCATTAGCTGATAGTGAAAGGAGGGACTATGAGGAGGAAATTGAGAGGCT
CAAGTGTGATAATGCATCACTGAACTTACAGCTTGAAAGGAAGAAAACTGATATGGAGAGTAAAAT
GAAGGCTTTGGAAGACAAACTATTTGCTATCGAGGATCAGCAGAAAAATCTTATATCTTATGTCAG
AGAAATTGTGAATGCACCTGGATTTTTGTCTAGCTTCGTAGAACAATCTGATCATCACGGAAAGAA
GAGGAGACTGCCTAAACCAATTTCATTCCATGAGGATACAAGTACTCAGGGGAACCAGATTATGCA
TTGTGACTTGGTCAACTCACCAACTCATGAACTTTTTAGGGCATCATTTGACAAAATGGAATCATC
CTTAAATTCCTTGGAGAATTTCTTCAAAGAAGCGAGCGAGGCATTTGGTAATGATGTTTCATATGA
TGGTGATGTCCCAGGTCATTCTTCAGCTGTTGTTCTTACAGAGCTCCATTCATCTGCGGAGAGTGA
GCCCCACGAGCAATCACCTCCGTCCATGATGCATACTTGTTCAGCTGGTGTAGGAGATTCACACTC
TTCTCGCGATATAGCAGAGTCCGCCAGCTGTCCAGAGAGTCCTCCGCTTCCCGAAGCTCATTCTCG
TGCAGATTCACGAGCTAAGGTCTCCGAGATAGATGTCAATTTGGAACCTGCTGCTACAGAAACTGG
TCCATCGAGAGATCAACAACCCACCCAAGACCCTCCTGCTGATGCAAATGATGGATTTTGGCAGCA
GTTTCTTACCGAGCAGCCTGGGTCATCCCATGCA CACCAGGAGGCCCAATCAGAACGGCGAGAC
AGAGAAGCAAATCAAACAACAGCAGGAGACCGCGGAAGTTTTTGGTGGGGCAAGAGCGTCGAACAG
ATGACAGAAAAACTGGGGCATCTCACCTCAGCTGAGAAAACCTGAGTATGTACTTCTCATTTCTTG
TAGCTGAAAAATGACCAGTACAGAAACATTAGGACGATGGCACCTCCCAGTGAGATGTGCCTACTA
ACATTTACTTCGCAGTGTATCATAATCGCGTGCTTAGATTGTTGCAGACTATGTGCTATACTACCT
TGATATACGTTCATACTTTGTTAGCTACACGTTCAGACACCATTGTCAATGACTCGTGATATTTTT
CAGATTTGTGGTTCTTTTGTGACAACTACGCGTTGCAGTTCAGAGCTGTTGCCTGTTGGAGGGTTT
TTATTTTTATTTTTGTGCATGTTGCCAGCTATTTGAACCATGGTCAAGAATTTCCTTGTTTGTGAA
ACATGAACCCTTGTTATTTCTTGCCGTAGTGGCTTCAGAT
Metabolic Pathways
Description loc_os01g54550.1:593.0)no description available & (at4g18880:217.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A4A (HSF A4A)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In response to chitin
Located In nucleus
Expressed In 23 plant structures
Expressed_During 13 growth stages
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1) Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2 Bacteria - 4 Metazoa - 360 Fungi - 491 Plants - 856 Viruses - 0 Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 434.0) & (original description: len=1556 path=[0:0-79 2:80-1555])

Ensembl Plants
Sequence Id	TRINITY_DN7730_c0_g1_i1
Heat Stress Genes	A4b
New Transcript Id	TraesCS7D02G270600.1
Functional Annotation
Gene ontology	XP_020165982.1
Protein family Detail
Type	-
Transcripts Per Million
TPM	5.13
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	3.54
Sequence	CGATCTCTGCCGGGATCTTCTCCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTTGTGCGCCA GCTCAACACCTACGGCTTTAGGAAGGTAGATCCAGAACAATGGGAATTTGCAAATGAAGAATTCAT ACGAGACCAGCGGCATCGGTTGAAAAATATCCATAGACGCAAGCCAATATTCAGCCATTCATCACA TACTCAGGGTGCCGGACCATTAGCTGATAGTGAAAGGAGGGACTATGAGGAGGAAATTGAGAGGCT CAAGTGTGATAATGCATCACTGAACTTACAGCTTGAAAGGAAGAAAACTGATATGGAGAGTAAAAT GAAGGCTTTGGAAGACAAACTATTTGCTATCGAGGATCAGCAGAAAAATCTTATATCTTATGTCAG AGAAATTGTGAATGCACCTGGATTTTTGTCTAGCTTCGTAGAACAATCTGATCATCACGGAAAGAA GAGGAGACTGCCTAAACCAATTTCATTCCATGAGGATACAAGTACTCAGGGGAACCAGATTATGCA TTGTGACTTGGTCAACTCACCAACTCATGAACTTTTTAGGGCATCATTTGACAAAATGGAATCATC CTTAAATTCCTTGGAGAATTTCTTCAAAGAAGCGAGCGAGGCATTTGGTAATGATGTTTCATATGA TGGTGATGTCCCAGGTCATTCTTCAGCTGTTGTTCTTACAGAGCTCCATTCATCTGCGGAGAGTGA GCCCCACGAGCAATCACCTCCGTCCATGATGCATACTTGTTCAGCTGGTGTAGGAGATTCACACTC TTCTCGCGATATAGCAGAGTCCGCCAGCTGTCCAGAGAGTCCTCCGCTTCCCGAAGCTCATTCTCG TGCAGATTCACGAGCTAAGGTCTCCGAGATAGATGTCAATTTGGAACCTGCTGCTACAGAAACTGG TCCATCGAGAGATCAACAACCCACCCAAGACCCTCCTGCTGATGCAAATGATGGATTTTGGCAGCA GTTTCTTACCGAGCAGCCTGGGTCATCCCATGCA CACCAGGAGGCCCAATCAGAACGGCGAGAC AGAGAAGCAAATCAAACAACAGCAGGAGACCGCGGAAGTTTTTGGTGGGGCAAGAGCGTCGAACAG ATGACAGAAAAACTGGGGCATCTCACCTCAGCTGAGAAAACCTGAGTATGTACTTCTCATTTCTTG TAGCTGAAAAATGACCAGTACAGAAACATTAGGACGATGGCACCTCCCAGTGAGATGTGCCTACTA ACATTTACTTCGCAGTGTATCATAATCGCGTGCTTAGATTGTTGCAGACTATGTGCTATACTACCT TGATATACGTTCATACTTTGTTAGCTACACGTTCAGACACCATTGTCAATGACTCGTGATATTTTT CAGATTTGTGGTTCTTTTGTGACAACTACGCGTTGCAGTTCAGAGCTGTTGCCTGTTGGAGGGTTT TTATTTTTATTTTTGTGCATGTTGCCAGCTATTTGAACCATGGTCAAGAATTTCCTTGTTTGTGAA ACATGAACCCTTGTTATTTCTTGCCGTAGTGGCTTCAGAT
Metabolic Pathways
Description	loc_os01g54550.1:593.0)no description available & (at4g18880:217.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A4A (HSF A4A)
Function	DNA binding, sequence-specific DNA binding transcription factor activity
Involve In	response to chitin
Located In	nucleus
Expressed In	23 plant structures
Expressed_During	13 growth stages
Domains/Interpro	Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics	winged-helix DNA-binding transcription factor family protein (TAIR:AT5G45710.1) Has 2263 Blast hits to 2244 proteins in 239 species: Archae - 2 Bacteria - 4 Metazoa - 360 Fungi - 491 Plants - 856 Viruses - 0 Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 434.0) & (original description: len=1556 path=[0:0-79 2:80-1555])