HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)



Sequence IdTRINITY_DN81578_c0_g1_i1
Heat Stress GenesC1b
Ensembl Plants
New Transcript IdTraesCS7D02G367700.1
Functional Annotation
Gene ontologyXP_020179067.1
Protein family Detail
Type-
Transcripts Per Million
TPM6.39
Fragments Per Kilobase of transcript per Million mapped reads
FPKM4.41
SequenceAAGCACCGCAACTTCGCCAGCTTCGTCCGGCAGCTCAACACCTACGGTTTTCGCAAGGTTGACCCG
GACGTGTGGGAGTTCGCGCACGAGTCGTTCCTGCGCGGCCAGGCGAAGCTGCTGCCGCTGATCGTG
CGCAAGAAGAAGAGAGCCGGCGCCGGCCCGGCGGGGAGGGAGCTGTGCGAGGAGGAAGAGGAGGTG
CGGGGAACGATCCAGGCGGTGCAGAGGCTGCGGGACGAGCGGAGGGGCATGGAGGAGGAGCTGCAG
GCCATGGACCGCAGGCTCTGTGCGGCGGAGAACCGGCCAGGCCAGATGATGGCCTTCCTCGGCAAG
CTCGCGGACGACCCGGGCGTGGTGCTGCGCGCTATGGTCGCCAAGAAGGAGGAGCTGGCTGCGGCC
GGTGCCGGTGGCAAGGATTCAAGCCCGGATAAGAGGAGGCGGATCGGGGCCGACGCCGGACGCGGA
GCCGACGCTGCGGATCAGGCGGCCCAGAGCAGGGCCGTGCCGTTCCCCTTCTCTAATCTGGGACAG
GTGTTCTACTGATAGACCTTGGGACTCGAGAGTTGATAGATAGGTGTACACGTGTGATGTTTTGGT
GTTTATGTATGTGTATATGTATGTACAGTGTACTTCCCCTCGGCATAGTTGCTATCTGACCGTCTG
ATTGCCGCCATAGTAGTCACTCCAGCCACGAGTTTTAGCATTTAGAACTAGTTTTAGCATTTAGAA
ATGTGGTTTTTAAGTGGGTTTATATGTACCCGGGTTCGTCGATGCATTTTCCCTTCACCA
Metabolic Pathways
Descriptionloc_os01g53220.1:209.0)no description available & (at3g24520:119.0) member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor C1 (HSFC1)
Function DNA binding, sequence-specific DNA binding transcription factor activity
Involve In regulation of transcription, DNA-dependent
Located In nucleus
Expressed In 14 plant structures
Expressed_During LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible
Domains/Interpro Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Interferon induced 35kDa, N-terminal (InterPro:IPR009938), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232)
Best Arabiophosystemics heat shock factor 1 (TAIR:AT4G17750.1) Has 2230 Blast hits to 2217 proteins in 240 species: Archae - 2 Bacteria - 4 Metazoa - 382 Fungi - 481 Plants - 788 Viruses - 0 Other Eukaryotes - 573 (source: NCBI BLink). & (reliability: 238.0) & (original description: len=786 path=[0:0-785])