HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN4716_c0_g1_i6
Heat Stress Genes A1E
Ensembl Plants
New Transcript Id TraesCS7B02G272500.1
Functional Annotation
Gene ontology AHZ44763.1
Protein family Detail
Type Domain
Transcripts Per Million
TPM 2.79
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 4.3
Sequence GTGGGCATATATGGCATGCCTGAGTTGCCTGGGACCTCTGCAAGGGTGACTGCAGAATTCCGGGTT
GATGAAGAGCTGTCAAAAGTTTGAGCACTTGGCATACAGTTCTCCAGTAGCAAATTATCTGAATTG
CCCATGGATTCAAATCTGTGTGGGGAGGTATCCTGCTGCAGGATCTTCCTCAGCATTGCTTTGGCT
GCTTCGTTGATCATAGGCTGATACTTGATTATCTGGCCATCCAACAACGCACTTTCAGAGTTCAGG
CCATCATCTTGCTTAGGTAGCCTCCTTTTCTTGTTCGCAGCTACTATTCTCCGTTTGCTGTTTTCA
TTCTGCTGTACAAACTGTGCTAGGAAGCCAGGACTCTGCATTGCTTTGGCCAGGAAAGACATCATT
TGTTGCTGTCGCTGCTCCATTCCGTGAAGACGCTTGCCCAAAGTCTGCAGCTGATGGTCAGTGGTC
TGCTGTTGCTGTCTCAGCCTGACAAGCTCCTGCATTAGAACGTTTTTATCCCTCTTTAGCATCTCA
ATCTCTTCCTCCATCCCAAACTTCCCCACCTCTACACAAGAAGGCATTGGAGCATTCTGCAGCTGG
GGTTGCTGCTGATGCTGCTGCTGGTGGTGCTGTTGCTGCTGTGGCACTTGCACTTGGTTGTTTGCA
TGCGATGGTTTCCTTCTGGTGATGGTCTTCAGTAGATGTTTTTGACCTCTCAAAAAACCCTCATTT
GCAAATTCCCACTTGTCTGGATCAACTTTTCTGAATCCGTAGGTGTTGAGCTGCCTGACGAAGGAG
GAGAAGTTGTTGTGCTTGAAGTACTTGGGGAGGAGGTCCCGGGCGAACTCGGGCGTGTTCCAGACG
ATGAAGCTGTTGTTGGCCGGGCCCCAGGAGACGACGGCGTCCGTGGCCGGGTCGTCCACCATGTCG
TACGTCTTCA
Metabolic Pathways
Description (loc_os03g63750.1 : 468.0) no description available & (at5g16820 : 320.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3);
Function -
Involve In -
Located In -
Expressed In -
Expressed_During -
Domains/Interpro CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232);
Best Arabiophosystemics BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (reliability: 640.0) & (original description: len=934 path=[15:0-298 17:299-329 18:330-343 20:344-407 21:408-800 22:801-933])

Ensembl Plants
Sequence Id	TRINITY_DN4716_c0_g1_i6
Heat Stress Genes	A1E
New Transcript Id	TraesCS7B02G272500.1
Functional Annotation
Gene ontology	AHZ44763.1
Protein family Detail
Type	Domain
Transcripts Per Million
TPM	2.79
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	4.3
Sequence	GTGGGCATATATGGCATGCCTGAGTTGCCTGGGACCTCTGCAAGGGTGACTGCAGAATTCCGGGTT GATGAAGAGCTGTCAAAAGTTTGAGCACTTGGCATACAGTTCTCCAGTAGCAAATTATCTGAATTG CCCATGGATTCAAATCTGTGTGGGGAGGTATCCTGCTGCAGGATCTTCCTCAGCATTGCTTTGGCT GCTTCGTTGATCATAGGCTGATACTTGATTATCTGGCCATCCAACAACGCACTTTCAGAGTTCAGG CCATCATCTTGCTTAGGTAGCCTCCTTTTCTTGTTCGCAGCTACTATTCTCCGTTTGCTGTTTTCA TTCTGCTGTACAAACTGTGCTAGGAAGCCAGGACTCTGCATTGCTTTGGCCAGGAAAGACATCATT TGTTGCTGTCGCTGCTCCATTCCGTGAAGACGCTTGCCCAAAGTCTGCAGCTGATGGTCAGTGGTC TGCTGTTGCTGTCTCAGCCTGACAAGCTCCTGCATTAGAACGTTTTTATCCCTCTTTAGCATCTCA ATCTCTTCCTCCATCCCAAACTTCCCCACCTCTACACAAGAAGGCATTGGAGCATTCTGCAGCTGG GGTTGCTGCTGATGCTGCTGCTGGTGGTGCTGTTGCTGCTGTGGCACTTGCACTTGGTTGTTTGCA TGCGATGGTTTCCTTCTGGTGATGGTCTTCAGTAGATGTTTTTGACCTCTCAAAAAACCCTCATTT GCAAATTCCCACTTGTCTGGATCAACTTTTCTGAATCCGTAGGTGTTGAGCTGCCTGACGAAGGAG GAGAAGTTGTTGTGCTTGAAGTACTTGGGGAGGAGGTCCCGGGCGAACTCGGGCGTGTTCCAGACG ATGAAGCTGTTGTTGGCCGGGCCCCAGGAGACGACGGCGTCCGTGGCCGGGTCGTCCACCATGTCG TACGTCTTCA
Metabolic Pathways
Description	(loc_os03g63750.1 : 468.0) no description available & (at5g16820 : 320.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3);
Function	-
Involve In	-
Located In	-
Expressed In	-
Expressed_During	-
Domains/Interpro	CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232);
Best Arabiophosystemics	BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (reliability: 640.0) & (original description: len=934 path=[15:0-298 17:299-329 18:330-343 20:344-407 21:408-800 22:801-933])