HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN5914_c0_g1_i5
Heat Stress Genes A6B
Ensembl Plants
New Transcript Id TraesCS7D02G367700.1
Functional Annotation
Gene ontology AHZ44765.1
Protein family Detail
Type Domain
Transcripts Per Million
TPM 7.35
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 11.35
Sequence AGATGAAACATGAAGAAAGTCGCCGCAATTTGATAGAATGAAATGGAACTAGGTTGAGAGGGTTGG
ACTATTTGGGATGAAATAGCCCATCTTCTCAGACAGCACATCCATGCCGTCTACGTTAACCGGCTC
GTCGTTCTCAACGCTGAGTCCTTTGTTCAGCAGCTCCTCCCAGAAATTATCATGGAACAGCCCCAG
GGCTCTGTTCTGCTGCGCTTCACAGGTACCGAGACCATAATCCTGTGGCTCTGTTACGCCGTTAGA
GTCGATACCTGAGCCGTCGAGATCAGATGGAATCCCATCAACAAGGAGTTCCACGGAACCTTCCAG
GCCGTCAGCAAGGAGTGCCACTGAACCTTCCAGGCCAGGTGGGATCTCGTCAGCAAGGAGTTCCAC
TGAGCCTTCCAGATCGGGTGGGATCCCGTCAGAAAGGAGTTCCACCGGCACCGACCCCTCGGCAAG
AAGTTCCACTGACCCATGAGAATCAAACACAACAGGCAACTCTTGGTCCAGGCTGCTGCTACTAGC
ACCCATGGCATAAGCTTCAGGTCCACCGTCGATGCGGCGCCTCCTTTTCTTCGAGATAGCGTCATG
GAGCTCCTTCCTCATCCCATTCTTGGCAATCAGTTGCTTCAAGAATTCAGGGTTCCGCAAGATACG
TGCCATGAATGAAGTCATCTGCTGCTGCTTCTGCTCGGTTCCACGTAGCCTATCCTCCATGGCTTT
CAGATGCACCTTCATGTTCTGCTGTTCCTGCCTTAGCTTCACCACTTCTGCCATCAACAGTTGCTT
GTCCCTTTTCAGCCGGTCAATCTCTGCATCATATCCGAAGTGCCCCACCTCAAGGTAAGATCCAAG
GGACTGCTGATTTGAGGCAGTATGAGCGGGAGGTTTACGACGCCTGATGTTCTTCAGAAGGTGCCT
CTGTCCCCGTAGGAAACCCTCATTGGCGAACTCCCATCTGTCAGGATCCACCTTTCTGAAGCCATA
GGTGTTGAGTTGCCTGACGAAGCTGGAGAAGTTG
Metabolic Pathways
Description (loc_os07g08140.1 : 481.0) no description available & (at3g22830 : 303.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B);
Function FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity;
Involve In INVOLVED IN: regulation of transcription, DNA-dependent;
Located In LOCATED IN: nucleus;
Expressed In EXPRESSED IN: root;
Expressed_During -
Domains/Interpro CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232);
Best Arabiophosystemics BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 562.0) & (original description: len=1206 path=[3:0-40 11:41-116 13:117-150 14:151-190 15:191-235 17:236-262 18:263-290 20:291-317 22:318-337 23:338-362 25:363-447 26:448-498 28:499-533 29:534-782 31:783-810 32:811-872 34:873-915 35:916-950 36:951-960 38:961-963 39:964-1001 40:1002-1205])

Ensembl Plants
Sequence Id	TRINITY_DN5914_c0_g1_i5
Heat Stress Genes	A6B
New Transcript Id	TraesCS7D02G367700.1
Functional Annotation
Gene ontology	AHZ44765.1
Protein family Detail
Type	Domain
Transcripts Per Million
TPM	7.35
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	11.35
Sequence	AGATGAAACATGAAGAAAGTCGCCGCAATTTGATAGAATGAAATGGAACTAGGTTGAGAGGGTTGG ACTATTTGGGATGAAATAGCCCATCTTCTCAGACAGCACATCCATGCCGTCTACGTTAACCGGCTC GTCGTTCTCAACGCTGAGTCCTTTGTTCAGCAGCTCCTCCCAGAAATTATCATGGAACAGCCCCAG GGCTCTGTTCTGCTGCGCTTCACAGGTACCGAGACCATAATCCTGTGGCTCTGTTACGCCGTTAGA GTCGATACCTGAGCCGTCGAGATCAGATGGAATCCCATCAACAAGGAGTTCCACGGAACCTTCCAG GCCGTCAGCAAGGAGTGCCACTGAACCTTCCAGGCCAGGTGGGATCTCGTCAGCAAGGAGTTCCAC TGAGCCTTCCAGATCGGGTGGGATCCCGTCAGAAAGGAGTTCCACCGGCACCGACCCCTCGGCAAG AAGTTCCACTGACCCATGAGAATCAAACACAACAGGCAACTCTTGGTCCAGGCTGCTGCTACTAGC ACCCATGGCATAAGCTTCAGGTCCACCGTCGATGCGGCGCCTCCTTTTCTTCGAGATAGCGTCATG GAGCTCCTTCCTCATCCCATTCTTGGCAATCAGTTGCTTCAAGAATTCAGGGTTCCGCAAGATACG TGCCATGAATGAAGTCATCTGCTGCTGCTTCTGCTCGGTTCCACGTAGCCTATCCTCCATGGCTTT CAGATGCACCTTCATGTTCTGCTGTTCCTGCCTTAGCTTCACCACTTCTGCCATCAACAGTTGCTT GTCCCTTTTCAGCCGGTCAATCTCTGCATCATATCCGAAGTGCCCCACCTCAAGGTAAGATCCAAG GGACTGCTGATTTGAGGCAGTATGAGCGGGAGGTTTACGACGCCTGATGTTCTTCAGAAGGTGCCT CTGTCCCCGTAGGAAACCCTCATTGGCGAACTCCCATCTGTCAGGATCCACCTTTCTGAAGCCATA GGTGTTGAGTTGCCTGACGAAGCTGGAGAAGTTG
Metabolic Pathways
Description	(loc_os07g08140.1 : 481.0) no description available & (at3g22830 : 303.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B);
Function	FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity;
Involve In	INVOLVED IN: regulation of transcription, DNA-dependent;
Located In	LOCATED IN: nucleus;
Expressed In	EXPRESSED IN: root;
Expressed_During	-
Domains/Interpro	CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232);
Best Arabiophosystemics	BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 562.0) & (original description: len=1206 path=[3:0-40 11:41-116 13:117-150 14:151-190 15:191-235 17:236-262 18:263-290 20:291-317 22:318-337 23:338-362 25:363-447 26:448-498 28:499-533 29:534-782 31:783-810 32:811-872 34:873-915 35:916-950 36:951-960 38:961-963 39:964-1001 40:1002-1205])