HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN5914_c0_g1_i6
Heat Stress Genes A6B
Ensembl Plants
New Transcript Id TraesCS7B02G267300.1
Functional Annotation
Gene ontology AHZ44766.1
Protein family Detail
Type Domain
Transcripts Per Million
TPM 8.44
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 13.04
Sequence GTTTTTATGTGATACATATATTTCGTTAGTCAAATTGACGACCTAACCACAAAGATGCCTATAAAT
CCAGACAGGAGTACAACTTTAGCCCACAAAAGACTGTCTTACACGGTATAGATCAGAACATGTGCA
TTGAACAGCTAGCAGTACAGACTGACGAGGCTATATTGCCTGAAACAACAAACAGATCTCTAAGGT
CAATCGAAGGAAACACTGATAAATCACATAATCCCAGGGAAGTCTAGGGTTTAGACGACTCGAAGA
CCAGGACACGGTGGGGACGACACTTGCATATGCACTGCAGGGTGGATAGATGAAACACGAAGAAAG
TCGCGGCAATTTGATAGAATGGAATGGAACTAGGTTGAGAGGGTTGGACTATTTGGGATGAAATAG
CCCATCTTCTCAGACAGCACATCCATGCCGTCGGCGTTAACCGGCTCGTCGTTCTCACCGCTGAGC
CCTTTGTTCAGCAGCTCCTCCCAGAAATTATCATGGAACAACCCCGGGACTCTGTTCTGCTGCGCT
TCACATGTACCGAGACCAAAATCCTGTGGCTCTGTTACGCCGTTAGCGTCGATGCCTGAGCCGTTG
AGATCAGCTGGAATCCCATCAACAAGGAGTTCCACTGAACATTCCAGGTCAGGTGGAATCCCGTCA
TCAAGGAGTGCCACTGAACCTTCCAGATCTGGTGGGATCCCATCAGCAAGGAGTTCCACGGGCACC
GGCACTGACCCCTCGGCAAGAAGTTCCACTGACCCATGAGAATCAAACACAACAGGCGACTCTTGC
TCCAGGTTGCTGCTACTAGCGCCCACGGCATAAGCTTCAGGTCCACCGTCGATGCGGCGCCTCCTT
TTCTTCGAGATAGCGTCATGGAGCTCCTTCCTCATCCCATTCTTGGCAATCAGTTGCTTCAAGAAT
TCAGGGTTCCGCAAGATACGTGCCATGAATGAAGTCATCTGCTGCTGCTTCTGCTCGGTTCCACGT
AGCCTATCCTCCATGGCTTTCAGATGCACCTTCA
Metabolic Pathways
Description (loc_os07g08140.1 : 495.0) no description available & (at3g22830 : 303.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B);
Function FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity;
Involve In INVOLVED IN: regulation of transcription, DNA-dependent;
Located In LOCATED IN: nucleus;
Expressed In EXPRESSED IN: root;
Expressed_During -
Domains/Interpro CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232);
Best Arabiophosystemics BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 562.0) & (original description: len=1490 path=[1:0-117 5:118-168 7:169-280 9:281-321 10:322-351 11:352-427 12:428-461 14:462-501 16:502-546 17:547-573 19:574-601 20:602-628 21:629-660 23:661-685 24:686-731 26:732-782 27:783-817 29:818-1066 30:1067-1094 32:1095-1156 33:1157-1199 35:1200-1234 37:1235-1247 39:1248-1285 40:1286-1489])

Ensembl Plants
Sequence Id	TRINITY_DN5914_c0_g1_i6
Heat Stress Genes	A6B
New Transcript Id	TraesCS7B02G267300.1
Functional Annotation
Gene ontology	AHZ44766.1
Protein family Detail
Type	Domain
Transcripts Per Million
TPM	8.44
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	13.04
Sequence	GTTTTTATGTGATACATATATTTCGTTAGTCAAATTGACGACCTAACCACAAAGATGCCTATAAAT CCAGACAGGAGTACAACTTTAGCCCACAAAAGACTGTCTTACACGGTATAGATCAGAACATGTGCA TTGAACAGCTAGCAGTACAGACTGACGAGGCTATATTGCCTGAAACAACAAACAGATCTCTAAGGT CAATCGAAGGAAACACTGATAAATCACATAATCCCAGGGAAGTCTAGGGTTTAGACGACTCGAAGA CCAGGACACGGTGGGGACGACACTTGCATATGCACTGCAGGGTGGATAGATGAAACACGAAGAAAG TCGCGGCAATTTGATAGAATGGAATGGAACTAGGTTGAGAGGGTTGGACTATTTGGGATGAAATAG CCCATCTTCTCAGACAGCACATCCATGCCGTCGGCGTTAACCGGCTCGTCGTTCTCACCGCTGAGC CCTTTGTTCAGCAGCTCCTCCCAGAAATTATCATGGAACAACCCCGGGACTCTGTTCTGCTGCGCT TCACATGTACCGAGACCAAAATCCTGTGGCTCTGTTACGCCGTTAGCGTCGATGCCTGAGCCGTTG AGATCAGCTGGAATCCCATCAACAAGGAGTTCCACTGAACATTCCAGGTCAGGTGGAATCCCGTCA TCAAGGAGTGCCACTGAACCTTCCAGATCTGGTGGGATCCCATCAGCAAGGAGTTCCACGGGCACC GGCACTGACCCCTCGGCAAGAAGTTCCACTGACCCATGAGAATCAAACACAACAGGCGACTCTTGC TCCAGGTTGCTGCTACTAGCGCCCACGGCATAAGCTTCAGGTCCACCGTCGATGCGGCGCCTCCTT TTCTTCGAGATAGCGTCATGGAGCTCCTTCCTCATCCCATTCTTGGCAATCAGTTGCTTCAAGAAT TCAGGGTTCCGCAAGATACGTGCCATGAATGAAGTCATCTGCTGCTGCTTCTGCTCGGTTCCACGT AGCCTATCCTCCATGGCTTTCAGATGCACCTTCA
Metabolic Pathways
Description	(loc_os07g08140.1 : 495.0) no description available & (at3g22830 : 303.0) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor A6B (HSFA6B);
Function	FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity;
Involve In	INVOLVED IN: regulation of transcription, DNA-dependent;
Located In	LOCATED IN: nucleus;
Expressed In	EXPRESSED IN: root;
Expressed_During	-
Domains/Interpro	CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232);
Best Arabiophosystemics	BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 562.0) & (original description: len=1490 path=[1:0-117 5:118-168 7:169-280 9:281-321 10:322-351 11:352-427 12:428-461 14:462-501 16:502-546 17:547-573 19:574-601 20:602-628 21:629-660 23:661-685 24:686-731 26:732-782 27:783-817 29:818-1066 30:1067-1094 32:1095-1156 33:1157-1199 35:1200-1234 37:1235-1247 39:1248-1285 40:1286-1489])