HEAT STRESS GENES DATABASE

Responsive genes in Aegilops Speltoides (accession pau 3809) and Triticum aestivum (accession pau C273)

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Sequence Id TRINITY_DN8692_c0_g1_i1
Heat Stress Genes A5
Ensembl Plants
New Transcript Id TraesCS7D02G527500.1
Functional Annotation
Gene ontology XP_020200706.1
Protein family Detail
Type Domain
Transcripts Per Million
TPM 3.03
Fragments Per Kilobase of transcript per Million mapped reads
FPKM 4.68
Sequence CGGGTTACCGCCCATGGCGGTTGCGGTGGCCTCCGGTGGGTTGTCGCTTCCCTCGTCGACGGTGGT
GCTCCCGTCTGCATTGGACGCTTGACCTCTGTCGACATCCATCGAGCACGACGCTAGAGTTAGGCT
CAGATGGCACGGCGACAGCCCTTCGTCGTTTACAGCCGGCGTGAAGAACGAGCTCTTGGAGGGGCA
GATGGACGTCCCGGTATCGGAGAGCTCCATCATCTGTGGTACCAGAGGAAGGCATCCTGTCCCCAT
TCCTTCATGCCCTGGAGGATGCCTGCCATGCGGGCTACAGTTGTCTTCGTGCGAGCTTTGGGTGCT
CAGGGTGACGAGGTTGCTCTCTGCCGCCGCGGAGCAGAGCCCCAACTTGAGCTTATCGGAGAAGTG
CTGGTTCAGAAGGTTGCCCGTTTCTTGCCTGGAAGTGGGGCTATGGTCATCGCAGAAACTAGCCGT
TTCCGTGGCCTCGACGGCGTAGTCTAACCCGGATAGCCTTCTCTTCTTGTGCAAAGCGTCTGCGAA
CATCGAGGATGCCTCTGCCATCTTGACAAGCTTACCGACAAAGTGAGGGTTCTTGCTGGCCTGCTG
CAGGAAGGCGATCATCTTGCCTTGCCGCAGCTCCATGTCGACCGCTCGTCGCTCCAGGGCTTCAAT
CTGGAACATGGTTCCGGACTCCTGCTGCTTGGACTTCCAGAGCTCAGCCTGTAGGTTTGCTTTCTC
TCGTGCAAGCCGGTCGATCTCGTCTTCGAAGAATGAACGCTCGTTATCAGGCAGCGCACCTGGTTG
ATGACTGTGGCTGTGGATAGGCTTCCGCCTGTAGATGTTCTTCAGCAGGTGCTTCTGCCCCTTGAC
AAAGTACTCGTTACCGAATTCCCATCGCTCTGGATCTATTTTGCGGAATCCGTAGGTGTTGAGCTG
GCGGATGAAGCTGGAGAAATTGCTGTGCTTGAAGTAGGCGGGCAGCAGCCGCGCGGCGAACTCGGG
CGAGTTCCAGACCACGAAGCTCGTG
Metabolic Pathways
Description (loc_os02g29340.1 : 523.0) no description available & (at4g13980 : 262.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFA5;
Function FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity;
Involve In INVOLVED IN: regulation of transcription, DNA-dependent;
Located In LOCATED IN: nucleus;
Expressed In EXPRESSED IN: 22 plant structures;
Expressed_During EXPRESSED DURING: 11 growth stages;
Domains/Interpro CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232);
Best Arabiophosystemics BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 524.0) & (original description: len=1015 path=[0:0-1014])

Ensembl Plants
Sequence Id	TRINITY_DN8692_c0_g1_i1
Heat Stress Genes	A5
New Transcript Id	TraesCS7D02G527500.1
Functional Annotation
Gene ontology	XP_020200706.1
Protein family Detail
Type	Domain
Transcripts Per Million
TPM	3.03
Fragments Per Kilobase of transcript per Million mapped reads
FPKM	4.68
Sequence	CGGGTTACCGCCCATGGCGGTTGCGGTGGCCTCCGGTGGGTTGTCGCTTCCCTCGTCGACGGTGGT GCTCCCGTCTGCATTGGACGCTTGACCTCTGTCGACATCCATCGAGCACGACGCTAGAGTTAGGCT CAGATGGCACGGCGACAGCCCTTCGTCGTTTACAGCCGGCGTGAAGAACGAGCTCTTGGAGGGGCA GATGGACGTCCCGGTATCGGAGAGCTCCATCATCTGTGGTACCAGAGGAAGGCATCCTGTCCCCAT TCCTTCATGCCCTGGAGGATGCCTGCCATGCGGGCTACAGTTGTCTTCGTGCGAGCTTTGGGTGCT CAGGGTGACGAGGTTGCTCTCTGCCGCCGCGGAGCAGAGCCCCAACTTGAGCTTATCGGAGAAGTG CTGGTTCAGAAGGTTGCCCGTTTCTTGCCTGGAAGTGGGGCTATGGTCATCGCAGAAACTAGCCGT TTCCGTGGCCTCGACGGCGTAGTCTAACCCGGATAGCCTTCTCTTCTTGTGCAAAGCGTCTGCGAA CATCGAGGATGCCTCTGCCATCTTGACAAGCTTACCGACAAAGTGAGGGTTCTTGCTGGCCTGCTG CAGGAAGGCGATCATCTTGCCTTGCCGCAGCTCCATGTCGACCGCTCGTCGCTCCAGGGCTTCAAT CTGGAACATGGTTCCGGACTCCTGCTGCTTGGACTTCCAGAGCTCAGCCTGTAGGTTTGCTTTCTC TCGTGCAAGCCGGTCGATCTCGTCTTCGAAGAATGAACGCTCGTTATCAGGCAGCGCACCTGGTTG ATGACTGTGGCTGTGGATAGGCTTCCGCCTGTAGATGTTCTTCAGCAGGTGCTTCTGCCCCTTGAC AAAGTACTCGTTACCGAATTCCCATCGCTCTGGATCTATTTTGCGGAATCCGTAGGTGTTGAGCTG GCGGATGAAGCTGGAGAAATTGCTGTGCTTGAAGTAGGCGGGCAGCAGCCGCGCGGCGAACTCGGG CGAGTTCCAGACCACGAAGCTCGTG
Metabolic Pathways
Description	(loc_os02g29340.1 : 523.0) no description available & (at4g13980 : 262.0) member of Heat Stress Transcription Factor (Hsf) family; AT-HSFA5;
Function	FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity;
Involve In	INVOLVED IN: regulation of transcription, DNA-dependent;
Located In	LOCATED IN: nucleus;
Expressed In	EXPRESSED IN: 22 plant structures;
Expressed_During	EXPRESSED DURING: 11 growth stages;
Domains/Interpro	CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232);
Best Arabiophosystemics	BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 524.0) & (original description: len=1015 path=[0:0-1014])